Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
DECIPHER
•
reset
0
votes
3
replies
356
views
Issue::DesignPrimers DECIPHER
DECIPHER
DesignPrimers
updated 8 months ago by
slwmartin
• 0 • written 8 months ago by
Mailys
• 0
0
votes
1
reply
238
views
ORF finding in DECIPHER
ORF
DECIPHER
ORFhunteR
updated 11 months ago by
Erik Wright
▴ 150 • written 11 months ago by
tkirkland
• 0
0
votes
5
replies
865
views
Do DECIPHER:IdTaxa / dada2::assignTaxonomy work with ambigious reference training set?
decipher
dada2
updated 11 months ago by
fabian.roger08
▴ 10 • written 2.3 years ago by
fabian.roger
• 0
0
votes
5
replies
468
views
DECIPHER maximum allowable size
DECIPHER
Alignment
alig
updated 12 months ago by
Erik Wright
▴ 150 • written 12 months ago by
curiousmind007
• 0
0
votes
0
replies
309
views
DECIPHER Package on dada2 -Implementing Silva_metaxa2 training set from qza file into a fastq.gz/.Rdata
DECIPHER
dada2
13 months ago
anrongloh
• 0
0
votes
1
reply
264
views
Defining groups in Decipher by sequence position in the database (FASTA)
DefiningGroups
RStudio
DECIPHER
Specificprimers
updated 15 months ago by
Erik Wright
▴ 150 • written 15 months ago by
noeliaruizalonso23
• 0
0
votes
5
replies
841
views
Program not properly installed/program not accessible by system
R
decipher
updated 14 months ago by
Erik Wright
▴ 150 • written 2.1 years ago by
hoonhuiyi
• 0
0
votes
0
replies
258
views
DECIPHER Probe Design Questions
DECIPHER
18 months ago
henry1995910343
• 0
0
votes
2
replies
275
views
insufficient alignment
DECIPHER
Alignment
18 months ago
julius_vn
• 0
0
votes
3
replies
565
views
DECIPHER save alignement in outputs
msa
decipher
output
prettyPrint
updated 20 months ago by
UBodenhofer
▴ 290 • written 20 months ago by
matamunee
• 0
1
vote
6
replies
777
views
Issue with DECIPHER::IdTaxa
DECIPHER
IdTaxa
20 months ago
sebastian.mynott
• 0
0
votes
1
reply
256
views
convert sequences disambiguated with DECIPHER back to FASTA
DECIPHER
FASTA
disambiguate
23 months ago
joannew
• 0
0
votes
2
replies
304
views
how to design probes using decipher
R
decipher
2.0 years ago
hoonhuiyi
• 0
0
votes
5
replies
1.4k
views
Error in (function (classes, fdef, mtable)
software error
DECIPHER
updated 2.1 years ago by
shepherl
3.1k • written 2.1 years ago by
hoonhuiyi
• 0
0
votes
21
replies
1.0k
views
How to use DECIPHER to design group-specific primers
Decipher
2.1 years ago
hoonhuiyi
• 0
0
votes
1
reply
314
views
DECIPHER::AlignSeqs fails with a large guide tree
DECIPHER
updated 2.3 years ago by
Erik Wright
▴ 150 • written 2.3 years ago by
brendan.furneaux
▴ 10
0
votes
1
reply
282
views
PCR simulation with PNAs
PCR
DECIPHER
PNA
2.6 years ago
marissaruthlee
• 0
1
vote
2
replies
577
views
Display BrowseSeqs output in R Notebook?
BrowseSeqs
DECIPHER
notebook
rmarkdown
updated 2.7 years ago by
Erik Wright
▴ 150 • written 2.7 years ago by
lauren.fitch
• 0
0
votes
0
replies
286
views
Alignment larger than the maximum allowable size
DECIPHER
updated 2.9 years ago by
shepherl
3.1k • written 2.9 years ago by
cmasembe
• 0
2
votes
4
replies
703
views
How to get sequence homology percent from a multiple sequence alignment in DECIPHER?
decipher
r
protein alignment
4.0 years ago
reubenmcgregor88
• 0
2
votes
2
replies
930
views
How to combine sequences from different stringsets?
biostrings
decipher
updated 4.3 years ago by
Mike Smith
★ 5.5k • written 4.3 years ago by
reubenmcgregor88
• 0
1
vote
3
replies
671
views
Transform index to chromosome in DECIPHER package
decipher
updated 4.4 years ago by
Erik Wright
▴ 150 • written 4.4 years ago by
Vinicius Henrique da Silva
▴ 40
5
votes
7
replies
795
views
Is it possible to do an alignment to a chosen reference sequence in DECIPHER?
R
decipher
biostrings
updated 4.4 years ago by
Erik Wright
▴ 150 • written 4.4 years ago by
reubenmcgregor88
• 0
0
votes
2
replies
582
views
Is it possible to import many .tsr sequence file into R using bio strings for use in DECIPHER?
r
biostrings
decipher
4.4 years ago
reubenmcgregor88
• 0
2
votes
5
replies
856
views
Colour a phylogenetic tree, based on column in DECIPHER?
r
decipher
biostrings
updated 4.4 years ago by
Erik Wright
▴ 150 • written 4.4 years ago by
reubenmcgregor88
• 0
2
votes
3
replies
975
views
Is it possible to import a multiple fasta alignemnt (.mfa) file into DECIPHER?
decipher
DNA
biostrings
updated 4.4 years ago by
Erik Wright
▴ 150 • written 4.4 years ago by
reubenmcgregor88
• 0
0
votes
1
reply
713
views
DECIPHER - AlignSeqs error is.leaf(dend) node stack overflow
decipher
alignment
updated 4.6 years ago by
Erik Wright
▴ 10 • written 4.6 years ago by
emma.berdan
• 0
0
votes
1
reply
1.1k
views
AlignSeqs error: protect(): protection stack overflow
multiplealignment
decipher
4.6 years ago
c.l.frankling
• 0
2
votes
5
replies
1.1k
views
Multiple Sequence Alignment using DNA sequence
msa
decipher
5.0 years ago
bbista91
▴ 10
1
vote
5
replies
906
views
DECIPHER version bug using biocLite()
DECIPHER
5.9 years ago
Vinicius Henrique da Silva
▴ 40
0
votes
1
reply
631
views
Possible bug in ConsensusSequence
DECIPHER
updated 6.0 years ago by
Erik Wright
▴ 10 • written 6.0 years ago by
rob.lanfear
• 0
0
votes
3
replies
2.0k
views
mt.teststat
multtest
DECIPHER
multtest
DECIPHER
updated 6.3 years ago by
Smeeta Shrestha
▴ 20 • written 19.1 years ago by
Park, Richard
▴ 220
0
votes
0
replies
1.1k
views
Job: Bioinformatics Postdoc Position at the IMB, Mainz
Genetics
DECIPHER
Genetics
DECIPHER
8.2 years ago
Kathi Zarnack
▴ 110
0
votes
1
reply
723
views
Agi4x44PreProcess: Replicated Genes and Custom Annotation Database
Annotation
zebrafish
probe
DECIPHER
Annotation
zebrafish
probe
DECIPHER
updated 11.8 years ago by
Marc Carlson
★ 7.2k • written 11.8 years ago by
Samantha England
▴ 40
0
votes
1
reply
1.4k
views
boxplot error with expression set using oligo package and Human gene st 1.0 arrays
oligo
DECIPHER
oligo
DECIPHER
updated 12.0 years ago by
Benilton Carvalho
★ 4.3k • written 12.0 years ago by
jos matejus
▴ 30
0
votes
0
replies
779
views
Basic Question about gcrma & exporting to excel > (command not working)
Microarray
affy
gcrma
oligo
arrayQualityMetrics
DECIPHER
Microarray
affy
gcrma
oligo
12.0 years ago
Dick Beyer
★ 1.4k
0
votes
0
replies
988
views
'Heat Map for Genes in Dataset' in the '(project name).global.plots.pdf' output of the R-GSEA code
Genetics
Clustering
DECIPHER
Genetics
Clustering
DECIPHER
12.1 years ago
Radek Blatny
▴ 60
0
votes
0
replies
1.2k
views
Post-doc position in Paris
Sequencing
Epigenetics
Cancer
Breast
DECIPHER
Sequencing
Epigenetics
Cancer
Breast
12.9 years ago
Joern Toedling
▴ 450
0
votes
4
replies
832
views
help with large Rgraphviz output
graph
DECIPHER
graph
DECIPHER
updated 16.0 years ago by
Seth Falcon
★ 7.4k • written 16.0 years ago by
Kimpel, Mark W
▴ 890
39 results • Page
1 of 1
Recent ...
Replies
Comment: rtracklayer S.h
by
gibran
• 0
Thanks, much appreciated. So I think this approach actually gets binaries and I'm not sure how to isolate the problem I was experiencing as…
Comment: DESeq2, Calculate the size factor by using median-of-ratio
by
KEREN
• 0
Hi Michael, thank you for you reply. My concern here mainly focus on the high variances in samples of condition "mESC_mRNA_WT". I observed…
Comment: DiffBind: 0 consensus peaks for dba.peakset: New bug / undocumented change intro
by
Rory Stark
★ 4.4k
I agree the documentation could be clearer -- it took me a while to understand what it said so I could address your issue!
Answer: DiffBind: 0 consensus peaks for dba.peakset: New bug / undocumented change intro
by
chrarnold
• 0
Thanks a lot for your quick reply, it is very appreciated! Indeed, with your 2 suggested modifications, I can again reproduce the results f…
Answer: DiffBind: 0 consensus peaks for dba.peakset: New bug / undocumented change intro
by
Rory Stark
★ 4.4k
The object in the `.rds` file, `sampleMetaData.df`, is already a `DBA` object, with eight samples: > sampleMetaData.df <- readRDS("~/D…
Votes
Answer: rtracklayer S.h
Answer: rtracklayer S.h
Answer: DESeq2: Extracting Averaged Counts Information from dds and rld
Answer: DESeq2: Extracting Averaged Counts Information from dds and rld
Answer: DESeq2: Extracting Averaged Counts Information from dds and rld
Awards
• All
Scholar
to
jared.andrews07
▴ 30
Scholar
to
vanbelj
▴ 10
Scholar
to
James W. MacDonald
59k
Popular Question
to
Johannes Rainer
★ 1.9k
Popular Question
to
Gordon Smyth
45k
Locations
• All
United States,
just now
EMBL Heidelberg / de.NBI,
5 minutes ago
United Kingdom,
5 minutes ago
United States,
14 minutes ago
United States,
23 minutes ago
Traffic: 640 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6