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Peak
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6
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1.3k
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min enrichment in peak calling with diffHiC?
diffhic
peak
updated 7.0 years ago by
Aaron Lun
★ 28k • written 7.0 years ago by
hwick1
▴ 20
0
votes
1
reply
1.2k
views
DiffBind: Consensus peak score ?
diffbind
peak
chipseq
updated 7.9 years ago by
Rory Stark
★ 5.2k • written 7.9 years ago by
becavin.christophe
• 0
0
votes
2
replies
1.5k
views
How to take sample peak from each chromosome in peak bed files ?
r
chipseq
encode
peak
7.4 years ago
Jurat Shahidin
▴ 80
0
votes
0
replies
1.6k
views
ATAC-seq: Sample size when pooling sample reads to call peaks
atac-seq
sample size
Peak
Normalize
6.3 years ago
jaime.alvarez.benayas
• 0
4 results • Page
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Answer: How to save the DEXSeq results
by
Michael Love
41k
If you look at the output here: https://bioconductor.org/packages/release/bioc/vignettes/DEXSeq/inst/doc/DEXSeq.html#4_Testing_for_differe…
Answer: Method to find pathways different between 2 groups
by
Robert Castelo
★ 3.3k
Hi, regarding how could you combine the result from each tool, one option is using a so-called "ensembl method", for instance, the package …
Answer: Couldn't connect to server while using "pathways"
by
James W. MacDonald
65k
As ATpoint already noted, you should proceed from the assumption that your audience knows nothing about what you are doing, and provide eno…
Answer: Trim/Filter out-of-bounds GRanges
by
Michael Love
41k
https://support.bioconductor.org/p/73432/#73448
Comment: Couldn't connect to server while using "pathways"
by
Michael Love
41k
You've put the tag "DESeq2" which results in an email to the maintainer, me, that I should respond to a post on the support site. Can you …
Votes
Answer: Method to find pathways different between 2 groups
Answer: Method to find pathways different between 2 groups
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Answer: Method to find pathways different between 2 groups
Comment: Trying to use enrichGO
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