Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Polyester
•
reset
0
votes
7
replies
1.8k
views
Using Polyester to simulate large number of reads from a large transcriptome
polyester
rnaseq
updated 7.9 years ago by
jmfu
▴ 10 • written 7.9 years ago by
aditya892
• 0
0
votes
2
replies
1.4k
views
How to simulate a count matrix using Polyester
simulation
count matrix
RNA-seq
Polyester
updated 6.4 years ago by
Alyssa Frazee
▴ 210 • written 6.4 years ago by
fa.gholizadeh89
• 0
0
votes
2
replies
1.5k
views
RNA-seq read simulation for benchmarking differential expression/splicing variance
polyester
simulation
RNA-seq
syntheticdata
updated 3.5 years ago by
Gordon Smyth
50k • written 3.5 years ago by
Endre Sebestyén
▴ 70
0
votes
1
reply
422
views
polyester biases
polyester
updated 12 months ago by
Michael Love
41k • written 12 months ago by
Seongwoo Han
▴ 10
2
votes
1
reply
1.4k
views
polyester: adding noise to RNASeq counts?
rnaseq
polyester
updated 7.8 years ago by
Alyssa Frazee
▴ 210 • written 7.8 years ago by
krishna312
• 0
0
votes
1
reply
674
views
Error message
polyester
updated 3.2 years ago by
shepherl
3.9k • written 3.2 years ago by
avaniknejad686
• 0
0
votes
0
replies
605
views
Polyester - simulate_experiment_countmat with gtf
polyester
4.1 years ago
liorglic
▴ 10
0
votes
0
replies
977
views
Could an experienced user of Polyester help me with some questions?
rna-seq
polyester
simulation
time course
6.4 years ago
fa.gholizadeh89
• 0
0
votes
0
replies
1.1k
views
Polyester - creating simulated reads based on raw count matrix
polyester
rnaseq
simulation
6.7 years ago
sseo2
• 0
0
votes
0
replies
455
views
polyester running question
polyester
18 months ago
Seongwoo Han
▴ 10
0
votes
0
replies
555
views
Range value of the dispersion parameters (a1, alpha 0 and sigmad)
polyester
dispersion
updated 3.1 years ago by
Michael Love
41k • written 3.1 years ago by
catalina.gonzalez-gomez
• 0
1
vote
0
replies
599
views
Polyester's simulate_experiment man pages / vignette description
polyester
4.6 years ago
Michael Love
41k
12 results • Page
1 of 1
Recent ...
Replies
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Gordon Smyth
50k
Please ask you own question. Inserting your own dataset into someone else's question like this is very impolite. I have already answered m…
Comment: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
limma most certainly is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of …
Comment: package goseq seems to be not available on the latest version of R
by
Patrycja
▴ 20
limma package also isn't available.Is there any information when these packages will be available?
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Chris
• 0
Thanks Gordon for the advice!
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…
Votes
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p-
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Handling multiple differential expression comparisons
Answer: fgsea significant result
Answer: fgsea significant result
Awards
• All
Scholar
to
ATpoint
★ 4.1k
Popular Question
to
Ben
▴ 50
Popular Question
to
Sam
▴ 10
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Zainab
▴ 10
Locations
• All
United States,
just now
WEHI, Melbourne, Australia,
2 minutes ago
France,
8 minutes ago
United States,
18 minutes ago
United States,
20 minutes ago
Traffic: 527 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6