Bioconductor RNASeq

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RNASeq scRNAseq

8 hours ago • updated 7 hours ago Bibi • 0

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1.9k

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sgseq rnaseq

updated 3 days ago by Leonard Goldstein ▴ 220 • written 6.7 years ago by Sylvain Foisy ▴ 80

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248

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DifferentialExpression TimeCourse timeOmics edgeR RNAseq

updated 4 days ago by Gordon Smyth 50k • written 5 days ago by Ashley • 0

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225

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DESeq2 StatisticalMethod Proteomics DifferentialExpression RNASeq

updated 17 days ago by ATpoint ★ 4.1k • written 17 days ago by james.zhang20 • 0

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165

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DESeq2 RNAseq

updated 24 days ago by Michael Love 42k • written 25 days ago by kcarey • 0

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191

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limma RNASeq voom

written 26 days ago by taur.vil • 0

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241

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technicalReplicates BatchEffect limma RNASeq

4 weeks ago • updated 27 days ago catv • 0

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313

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limma edgeR RNASeq

updated 9 days ago by Gordon Smyth 50k • written 4 weeks ago by Shaimaa Gamal • 0

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891

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clusterProfiler RNASeq

updated 25 days ago by Guangchuang Yu ★ 1.2k • written 14 months ago by ruiqi.li ▴ 10

9 results • Page 1 of 1

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Comment: all variables in design formula must be columns in colData (Deseq2) error by Galina • 0

thank you!

Comment: all variables in design formula must be columns in colData (Deseq2) error by ATpoint ★ 4.1k

coldata_rat <- data.frame(conditions=..., batch=...)

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by robersy • 0

Thank you all for your comments. I will follow your suggestions.

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0

Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0

Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…

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biomaRt not working - lazy table error

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

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