Bioconductor RNASeqSampleSize

Showing : RNASeqSampleSize • reset

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333

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RNASeq DifferentialExpression RnaSeqSampleSizeData RnaSeqSampleSize

updated 4 months ago by Gordon Smyth 50k • written 4 months ago by Shaimaa Gamal • 0

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262

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RnaSeqSampleSize

updated 4 months ago by ATpoint ★ 4.1k • written 4 months ago by Anudev • 0

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364

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RNASeqData RnaSeqSampleSize DESeq2

updated 5 months ago by James W. MacDonald 66k • written 5 months ago by Mimi • 0

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473

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RNASeqData RnaSeqSampleSize RNASeq RNASeqPower

5 months ago drewhaydensteele • 0

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283

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RnaSeqSampleSize

updated 6 months ago by Basti ▴ 780 • written 6 months ago by Durga ▴ 10

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425

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RNASeqData RnaSeqSampleSize RNASeqPower RNASeq

updated 7 months ago by Basti ▴ 780 • written 7 months ago by Luke • 0

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428

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SSPA ssizeRNA RnaSeqSampleSize

updated 8 months ago by James W. MacDonald 66k • written 8 months ago by Megan • 0

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Answer: Help with infinite recursion - non-zero exit status in installation of GenomeInf by James W. MacDonald 66k

Maybe just try again? ``` > install("GenomeInfoDbData", force = TRUE) 'getOption("repos")' replaces Bioconductor standard repositorie…

Comment: Help with infinite recursion - non-zero exit status in installation of GenomeInf by Brandon • 0

Hello, As an update, I am able to install and load GenomeInfoDb successfully in a fresh renv in my WSL distro. However, I'm not sure what …

Comment: slingshot: error with plot3d.SlingshotDataSet by Kelly Street • 0

This issue has been addressed [on GitHub][1]. [1]: https://github.com/kstreet13/slingshot/issues/249

Comment: Slightly different count plots from R and spreadsheet by Michael Love 42k

Change timepoint to an integer in the data frame: ``` as.numeric(as.character( <factor> )) ``` Then it should make points instead of boxe…

Answer: WGNCA kME vs. kIM by Vitor • 0

You can compare kIM and kME within module assignments. The plot below is for my network (I used Pearson correlation and signed network). !…

Votes

Including squared covariates to account for non-linear dependencies in differential gene expression analysis

DESeq2 DE gene expression of scRNA-seq pseudobulk

Answer: Multiple factor DSEq2 result generates weird volcano plot

DESeq2 for single cell pseudobulk processing

Simultaneously adding two different covariates in the model gives error in DESeq2.

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