Showing : Regression • reset
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Reference on linear models [was LIMMA makeContrasts question]
Regression limma Regression limma
18.8 years ago Gordon Smyth 53k
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845
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Reference on linear models
Regression limma Regression limma
18.8 years ago Katherine Lawler ▴ 10
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1.0k
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tricky batch problem
Metabolomics Regression Metabolomics Regression
18.9 years ago E. Schwarz ▴ 10
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790
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December Courses: (1) R/Splus Fundamentals and Programming Techniques (2) Regression Modeling Strategies in R/Splus
Regression Regression
18.9 years ago sue@xlsolutions-corp.com ▴ 570
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766
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(1) R/Splus Advanced Programming, NYC, Sept 11-12 (2) Regression Modeling Strategies in R/Splus, Sept 28-29
Regression Regression
19.1 years ago sue@xlsolutions-corp.com ▴ 570
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2.2k
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Limma weights, P values and differential expression
Normalization Bayesian Regression probe limma Normalization Bayesian Regression probe
19.1 years ago Gordon Smyth 53k
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3 Courses: (1) Prof Frank Harrell *** Regression Modeling Strategies in R/Splus, (2) R/Splus Advanced Programming, (3) R/Splus Fundamentals and Progr…
GO Regression GO Regression
19.1 years ago sue@xlsolutions-corp.com ▴ 570
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785
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Limma toptable question
Microarray Regression limma Microarray Regression limma
19.8 years ago Gordon Smyth 53k
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1.3k
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permutation/resampling FDR correction
Regression limma Regression limma
20.2 years ago Matthew Hannah ▴ 940
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915
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Binary regression trees
Regression Regression
updated 20.4 years ago by ▴ 210 • written 20.4 years ago by ▴ 10
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1.2k
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LIMMA:design (1, 2, 3, 3 ) , I got EXCITING results what could be the logic, since i have 2 replicates for 3rd group only?
Microarray GO Regression affy limma Microarray GO Regression affy limma
20.4 years ago Gordon Smyth 53k
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2.7k
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Cox MTP question
Microarray Regression multtest Microarray Regression multtest
20.5 years ago kpollard ▴ 110
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3.9k
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multtest and Cox regression
Regression multtest Regression multtest
updated 20.5 years ago by ▴ 10 • written 20.5 years ago by ▴ 140
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830
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Gene selection: association with linear response and correction for multi test
Regression limma siggenes Regression limma siggenes
20.5 years ago david neil hayes ▴ 70
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2.5k
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Dose-Response: Regressiion and ANOVA
Regression DOSE Regression DOSE
updated 20.8 years ago by ▴ 360 • written 20.8 years ago by ▴ 620
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1.2k
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Confusion over limma documentation and design/contrast matrix
GO Regression limma GO Regression limma
20.9 years ago michael watson IAH-C ★ 3.4k
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1.2k
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Confusion over limma documentation and design/contrast matrix
GO Regression limma GO Regression limma
20.9 years ago Gordon Smyth 53k
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912
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Re: limma linear model [was: (no subject)]
Regression Regression
21.0 years ago karen ▴ 30
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978
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limma linear model [was: (no subject)]
Regression Regression
21.0 years ago Gordon Smyth 53k
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937
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re: Loess
Regression Regression
21.0 years ago David Lee Duewer ▴ 40
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1.1k
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Unexpected results using limma with numerical factor - regression intercept?
GO Regression limma convert GO Regression limma convert
21.1 years ago Gordon Smyth 53k
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1.2k
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Unexpected results using limma with numerical factor - regression intercept?
GO Regression limma GO Regression limma
21.1 years ago Matthew Hannah ▴ 940
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1.1k
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RE: Design matrix with multiple genotypes + quantified variables (+cor/regression)
Regression limma Regression limma
21.1 years ago Gordon Smyth 53k
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1.1k
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RE: Design matrix with multiple genotypes + quantified variables (+cor/regression)
Regression limma Regression limma
21.1 years ago Matthew Hannah ▴ 940
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799
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Design matrix with multiple genotypes + quantified variables
Regression Regression
21.1 years ago Matthew Hannah ▴ 940
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2
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1.3k
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Drosophila GeneChip analysis
Regression Regression
updated 21.4 years ago by ▴ 620 • written 21.4 years ago by ▴ 30
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1.1k
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Interpretation of output of AffyRNAdeg and hist commands
Microarray Regression Cancer affyPLM Microarray Regression Cancer affyPLM
21.4 years ago James W. MacDonald 68k
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M vs A plot
Microarray Normalization Regression Cancer marray Microarray Normalization Regression
updated 21.6 years ago by ★ 6.0k • written 21.7 years ago by ★ 2.0k
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1.4k
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question about limma fit differences?
Regression limma Regression limma
updated 21.7 years ago by 53k • written 21.7 years ago by ▴ 20
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1.2k
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Conference announcement: Compstat 2004
Visualization Bayesian Classification Clustering Regression Visualization Bayesian
21.7 years ago Wolfgang Huber ★ 13k
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1.0k
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mean versus linear model?
Regression limma Regression limma
updated 21.7 years ago by ★ 6.0k • written 21.7 years ago by ▴ 340
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Release of Bioconductor 1.3
Microarray Annotation Normalization GO Classification Regression Cancer hgu95a cdf probe
21.9 years ago A.J. Rossini ▴ 810
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1.2k
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Conference announcement: Compstat 2004
Visualization Bayesian Classification Clustering Regression Visualization Bayesian
22.0 years ago Wolfgang Huber ★ 13k
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898
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Off topic: predoctoral grant
Regression Survival Cancer Regression Survival Cancer
22.0 years ago Ramon Diaz ★ 1.1k
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975
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p-value adjustment when two or more genes are compared at same time
Regression Cancer multtest Regression Cancer multtest
22.2 years ago Jason Liao ▴ 10
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1.4k
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Huber et al: Variance stabilization ...
Microarray Regression Microarray Regression
updated 22.7 years ago by ★ 13k • written 22.7 years ago by ▴ 60
136 results • Page 3 of 3
Recent ...
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Comment: incomplete imputation of missing values with LEA impute() function by Gordon Smyth 53k
Nadia, please tag your question with the name of the package ("LEA") that you are asking about. "impute" is the name of a different Biocond…
Comment: Sharing a collection of datasets in ExperimentHub by Aaron Lun ★ 29k
FYI the **scRNAseq** packages uses a non-ExperimentHub storage platform, see [here](https://github.com/ArtifactDB/gypsum-worker) for more d…
Comment: Error Loading Experiment from SimBenchData Package by ATpoint ★ 4.9k
Is the Seurat package installed? The error somewhat suggests that it could be related, and at https://www.bioconductor.org/packages/release…
Answer: Help with defining groups by Gordon Smyth 53k
Defining sample groups is separate to reading in the DIA-NN data, because the sample conditions and covariates are not necessarily coded in…
Comment: Sharing a collection of datasets in ExperimentHub by Peter Hickey ▴ 760
The [**scRNAseq**](https://bioconductor.org/packages/scRNAseq/) package ([source on GitHub](https://github.com/LTLA/scRNAseq)) might serve …
Votes
Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
Answer: ordinary t from limma [was: How would I normally compare swirl?]
Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
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