Showing : Regression • reset
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Binomial regression of HTqPCR data
Regression HTqPCR Regression HTqPCR
14.0 years ago Christopher Howerton ▴ 40
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Regression analysis using expression microarray to determine phenotypic correlation
Microarray Regression Microarray Regression
14.0 years ago Ruppert Valentino ▴ 270
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6
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1.9k
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SNPcounts error in SNPlocs.Hsapiens.dbSNP.20110815_0.99.3 (i.e., my attempt to update SNPlocs to dbSNP build 134)
Regression SNPlocs Biostrings Regression SNPlocs Biostrings
updated 14.1 years ago by 6.7k • written 14.1 years ago by ★ 4.2k
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1.1k
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Newbe question
Regression Regression
14.2 years ago SimonNoël ▴ 450
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1.3k
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Multiple regression, how to do fit all/stepwise/backward methods
Regression Regression
14.2 years ago Andrea Grilli ▴ 240
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2.0k
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limma: multiple regression
Regression Yeast yeast2 limma Regression Yeast yeast2 limma
14.3 years ago Gordon Smyth 53k
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1
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2.2k
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maSigPro and "subscript out of bounds"
Normalization Regression maSigPro Normalization Regression maSigPro
updated 14.3 years ago by ▴ 240 • written 14.3 years ago by ★ 6.8k
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maSigPro and "subscript out of bounds"
Normalization Regression maSigPro Normalization Regression maSigPro
14.4 years ago Andrea Grilli ▴ 240
4
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Evidence-based guidelines for use the method="robust" option in lmFit
Microarray Normalization Bayesian Regression Cancer limma Microarray Normalization Cancer
updated 4 months ago by • 0 • written 14.4 years ago by ★ 2.0k
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Bayesian additive regression trees (BART) for classification analysis of gene expression data
Bayesian Regression Bayesian Regression
14.6 years ago Santosh Patnaik ▴ 30
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3
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2.6k
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limma report logFC confidence interval?
Regression limma Regression limma
updated 4.3 years ago by 53k • written 14.7 years ago by ▴ 40
0
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3
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1.7k
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GCRMA: feature request
GO Regression probe gcrma frma GO Regression probe gcrma frma
updated 14.7 years ago by ▴ 250 • written 14.7 years ago by ★ 4.1k
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771
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limma report logFC confidence interval?
Regression Regression
14.8 years ago Timothy Wu ▴ 120
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1.5k
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qPCR Event Calendar - winter 2010
SNP qPCR Genetics Normalization Clustering Regression Cancer Breast Xenopus laevis probe
14.9 years ago qPCR Platform - the reference in real-t… ▴ 170
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963
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limma makeContrasts
GO Regression limma GO Regression limma
15.0 years ago Sunny Srivastava ▴ 350
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799
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Limma -time course - no replicates
Regression limma Regression limma
15.1 years ago Yair Benita ▴ 80
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7
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1.6k
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IRanges: interaction with model fitting
Regression IRanges Regression IRanges
updated 15.1 years ago by 25k • written 15.1 years ago by ★ 6.5k
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4
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1.7k
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Model variable optimisation
Regression probe limma AgiMicroRna Regression probe limma AgiMicroRna
updated 15.2 years ago by ▴ 330 • written 15.2 years ago by ▴ 60
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883
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[maSigPro] get.siggenes, PlotGroups - results
Regression Regression
15.4 years ago boczniak767 ▴ 740
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2
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1.2k
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missing values in limma/contrasts.fit
Microarray Regression probe limma Microarray Regression probe limma
updated 15.8 years ago by ▴ 70 • written 15.8 years ago by 53k
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5
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1.6k
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IRanges causes bug in complete.cases
Regression IRanges Regression IRanges
updated 15.8 years ago by ★ 11k • written 15.8 years ago by ★ 6.5k
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Bioconductor 2.5 is released
Sequencing miRNA Microarray qPCR Annotation Network Bayesian Regression CGH stam Rintact
15.9 years ago Patrick Aboyoun ★ 1.6k
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1
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1.9k
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paired microarray samples
Regression limma beadarray Regression limma beadarray
updated 16.0 years ago by ★ 6.0k • written 16.0 years ago by ▴ 60
0
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1
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1.2k
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predict an ordinal response variable from high-throughput gene expression data
Microarray Regression Microarray Regression
updated 16.0 years ago by ▴ 30 • written 16.0 years ago by ★ 1.0k
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2
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2.2k
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how to create an affybatch
Normalization Regression hgu133a probe Normalization Regression hgu133a probe
16.2 years ago Venkat Sundar ▴ 30
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1.2k
views
Filter before? Filter after? With maanova
Regression probe maanova Regression probe maanova
updated 16.2 years ago by ★ 5.5k • written 16.3 years ago by ★ 1.0k
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979
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Commands with maanova
Regression maanova Regression maanova
16.3 years ago Loren Engrav ★ 1.0k
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914
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RMA (model II) regression with lmFit
Regression Regression
16.3 years ago Paolo Innocenti ▴ 320
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New microRNA & qPCR workshop in April 2009
SNP qPCR Normalization Regression microRNA SNP qPCR Normalization Regression microRNA
16.5 years ago qPCR Platform - the reference in real-t… ▴ 170
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1.8k
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CMA package: variable selection with limma
Microarray Classification Regression limma CMA Microarray Classification Regression limma
16.6 years ago Renaud Gaujoux ▴ 170
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1.3k
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qPCR 2009 Event Agenda Online
SNP qPCR Normalization Visualization Regression Cancer probe microRNA SNP qPCR Cancer
16.7 years ago qPCR Platform - the reference in real-t… ▴ 170
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0
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1.4k
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NEW deadline - Talk & Poster Call - qPCR 2009 Event
SNP qPCR Normalization Visualization Regression Cancer probe microRNA SNP qPCR Cancer
16.7 years ago qPCR Platform - the reference in real-t… ▴ 170
0
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1
reply
1.6k
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Talk & Poster - Final Call - qPCR 2009 Event
SNP qPCR Normalization Visualization Regression Cancer probe PROcess microRNA SNP qPCR
16.8 years ago qPCR Platform - the reference in real-t… ▴ 170
0
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1
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2.7k
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forward conditional Cox and logistic regression
Genetics Regression Survival Genetics Regression Survival
updated 16.8 years ago by ★ 2.3k • written 16.8 years ago by ▴ 130
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1.5k
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Talk & Poster Call - qPCR 2009 Event
SNP qPCR Normalization Visualization Regression Cancer probe PROcess microRNA SNP qPCR
16.9 years ago qPCR Platform - the reference in real-t… ▴ 170
0
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2
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1.2k
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Does old workspace work?
Regression probe gcrma PROcess maanova Regression probe gcrma PROcess maanova
updated 16.9 years ago by ★ 6.5k • written 16.9 years ago by ★ 1.0k
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Maanova & createdata
Regression maanova Regression maanova
updated 16.9 years ago by ▴ 450 • written 16.9 years ago by ★ 1.0k
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multiscan package announcement
Regression Regression
16.9 years ago Mizanur Khondoker ▴ 10
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1.0k
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limma: Combining probe level data prior to fitting
Microarray Preprocessing Regression Yeast probe affy limma Microarray Preprocessing Yeast
17.0 years ago Alex Gutteridge ▴ 650
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5
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3.6k
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Finding genes with significant linear regression or trend
Microarray Regression Cancer limma DOSE Microarray Regression Cancer limma DOSE
updated 17.4 years ago by ▴ 340 • written 17.4 years ago by ★ 1.9k
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649
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extremely low adjusted p-values in regression using limma
Microarray Regression limma Microarray Regression limma
17.6 years ago Gordon Smyth 53k
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1.1k
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MolPAGE Training Workshop on Causal Inference - 19-21 May 2008
Genetics Regression Genetics Regression
17.6 years ago Brian D M Tom ▴ 50
0
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4
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2.5k
views
How to create nested data frames
Regression Regression
17.9 years ago Ana Conesa ▴ 130
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1
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1.6k
views
Bioconductor 2.1 is released
SNP Microarray SAGE Annotation Bayesian Regression GUI CGH hgu95av2 graph Rgraphviz SNP
18.0 years ago Hervé Pagès 16k
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1
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1.2k
views
batch effects and VSN
Normalization Regression vsn limma oligo Normalization Regression vsn limma oligo
updated 18.0 years ago by ★ 13k • written 18.0 years ago by ▴ 330
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1.1k
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Pvalue permutation of Linear regression
Regression Regression
18.3 years ago Benjamin Otto ▴ 830
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0
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916
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Regressions in multtest
Regression Regression
18.3 years ago Benjamin Otto ▴ 830
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0
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926
views
9 Courses: Upcoming July 2007 R/S+ schedule by XLSolutions Corp
Regression Regression
18.4 years ago sue@xlsolutions-corp.com ▴ 570
0
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5
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1.7k
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limma question: direct two-color design & modeling individual subject effects
SystemsBiology Regression probe limma SystemsBiology Regression probe limma
updated 18.4 years ago by ★ 1.1k • written 18.4 years ago by 53k
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Course*** R/S+: Fundamentals and Programming Techniques - Princeton, March 1-2
Microarray Classification Clustering Regression Microarray Classification Clustering
18.6 years ago sue@xlsolutions-corp.com ▴ 570
136 results • Page 2 of 3
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Comment: incomplete imputation of missing values with LEA impute() function by Gordon Smyth 53k
Nadia, please tag your question with the name of the package ("LEA") that you are asking about. "impute" is the name of a different Biocond…
Comment: Sharing a collection of datasets in ExperimentHub by Aaron Lun ★ 29k
FYI the **scRNAseq** packages uses a non-ExperimentHub storage platform, see [here](https://github.com/ArtifactDB/gypsum-worker) for more d…
Comment: Error Loading Experiment from SimBenchData Package by ATpoint ★ 4.9k
Is the Seurat package installed? The error somewhat suggests that it could be related, and at https://www.bioconductor.org/packages/release…
Answer: Help with defining groups by Gordon Smyth 53k
Defining sample groups is separate to reading in the DIA-NN data, because the sample conditions and covariates are not necessarily coded in…
Comment: Sharing a collection of datasets in ExperimentHub by Peter Hickey ▴ 760
The [**scRNAseq**](https://bioconductor.org/packages/scRNAseq/) package ([source on GitHub](https://github.com/LTLA/scRNAseq)) might serve …
Votes
Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
Answer: ordinary t from limma [was: How would I normally compare swirl?]
Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
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