Bioconductor RnaSeqSampleSizeData

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StatisticalMethod limma RnaSeqSampleSizeData

updated 4 weeks ago by Josh • 0 • written 9 weeks ago by ocanorocabayera • 0

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RNASeq DifferentialExpression RnaSeqSampleSizeData RnaSeqSampleSize

updated 21 months ago by Gordon Smyth 53k • written 21 months ago by Shaimaa Gamal • 0

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edgeR RnaSeqSampleSizeData RNAseq

updated 22 months ago by Gordon Smyth 53k • written 4.5 years ago by Lucy ▴ 60

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Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by dan.gatti • 0

I am, but perhaps I'm not understanding how it should work. > sse = DropletUtils::read10xCounts(curr_files[1], mtx.class = 'SVT_Sparse…

Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by James W. MacDonald 68k

Did you use the development version as Aaron suggested? There is an argument to read the market matrix file directly into an `SVT_SparseMat…

Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by dan.gatti • 0

Was anyone else able to put the pieces together using the reply above? I read in one 10X sample using DropletUtils::read10xCounts() and thi…

Comment: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and G by dzv20413 • 0

Wow, GBCC 2025 sounds amazing, can not wait to see the logo contest results! Also, I just played [Level Devil][1] and it is super addictive…

Comment: Memory error while running alignments by Erik Wright ▴ 150

How much memory is available on the computer? A distance matrix of 50k sequences requires at least 50k*50k/2 * 8 bytes = 10GB, assuming the…

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Comment: Check removeBatchEffect effectiveness

Answer: DESeq2 design for haplotype MPRA

Comment: Check removeBatchEffect effectiveness

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