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SCRAN
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reset
2
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3
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1.3k
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P-value histogram of testLinearModel is not uniform
smart-seq2
scRNAseq
scran
11 months ago
Lluís Revilla Sancho
▴ 730
0
votes
3
replies
475
views
scran package: quickCluster and calculateSumFactors parallelization
BiocParallel
scran
updated 4 months ago by
ATpoint
★ 4.1k • written 4 months ago by
qwang178
• 0
2
votes
2
replies
5.7k
views
scran ScoreMarkers throws a warning
scoreMarkers
scran
updated 11 months ago by
Peter Hickey
▴ 740 • written 11 months ago by
Assa Yeroslaviz
★ 1.5k
1
vote
2
replies
901
views
ScRNAseq analysis scran :: quickcluster Error
scRNAseq
quickcluster
scRNA
scran
5 months ago
ruba-mahmoud
• 0
0
votes
2
replies
859
views
runPCA in a SingleCellExperiment results ina colMeans error
scran
SingleCellExperiment
11 months ago
Lluís Revilla Sancho
▴ 730
1
vote
2
replies
177
views
Reproducibility issue with scran together with lapply and BiocParallel
scran
BiocParallel
bluster
25 days ago • updated 24 days ago
ATpoint
★ 4.1k
2
votes
1
reply
255
views
Existence of Bioconductor versus Seurat Software Ecosystems Quantitative Comparison
scran
bluster
scater
scuttle
updated 7 weeks ago by
ATpoint
★ 4.1k • written 7 weeks ago by
Dario Strbenac
★ 1.5k
0
votes
1
reply
385
views
Speeding up large scale scRNAseq analyses in R and improve memory
scran
updated 8 months ago by
ATpoint
★ 4.1k • written 8 months ago by
Maximilian
• 0
8 results • Page
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Comment: all variables in design formula must be columns in colData (Deseq2) error
by
Galina
• 0
thank you!
Comment: all variables in design formula must be columns in colData (Deseq2) error
by
ATpoint
★ 4.1k
coldata_rat <- data.frame(conditions=..., batch=...)
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
robersy
• 0
Thank you all for your comments. I will follow your suggestions.
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…
Votes
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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