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Answer: Ensembl plants at annotationHub?
by
Bruno
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Hi Johannes,
First, thank you so much for providing these annotations for the community. We feel often a bit left off in the plant commu…
Comment: DESeq2 on multilevel design variable
by
swbarnes2
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1.2k
Did you relevel before or after calling DESeq?
Comment: SummarizedExperiment is now warning on attach about `read_block` namespace confl
by
Hervé Pagès
16k
Available since last Friday. See https://bioconductor.org/packages/3.17/DelayedArray
Comment: Diffbind "No genome detected"
by
James W. MacDonald
63k
The error you see comes from an internal function called `pv.genome` that inspects the header of your BAM file and tries to infer the genom…
Comment: Diffbind "No genome detected"
by
kyliecode
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0
Hi James,
Thanks for your reply!
For the blacklist, I just used the one provided by DiffBind, which is "DBA_BLACKLIST_MM10".
For the grey…
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