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alteration
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Is there a package that help me draw copy number alteration for each chromosome?
copynumber
alteration
3.7 years ago
Arman Shahrisa
▴ 20
1 result • Page
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Comment: Scaling for p.heatmap
by
Bhavana
• 0
Okay, I understand...Thank you for the clarification! And thanks for pointing out that I need to update my versions :)
Comment: How to combine VCF-class and data.frame with annotations
by
didanax972
• 0
If you have more than one VCF file and want to merge all VCF files then you create one VCF file without any data loss by using VCF Merge & …
Comment: VariantAnnotation R Package - Merging Two VCF files
by
didanax972
• 0
In case you like to merge the numerous VCF files into a single file then you should opt for the VCF Merger tool. This tool is a dedicated a…
Comment: merging VCF files
by
didanax972
• 0
Use Merge VCF a quick and instant solution to combine multiple VCF files into a new VCF file. The tool effortlessly merges multiple VCF fil…
Comment: Error: DESeq(dds , useT = TRUE, minmu = 1e-06, test = "LRT", : likelih
by
ATpoint
★ 1.3k
Would you mind reading the vignette towards how the LRT works: http://bioconductor.org/packages/devel/bioc/vignettes/DESeq2/inst/doc/DESeq2…
Votes
C: DESeq2 lfcShrink() usage of coef vs. usage of contrast
C: DESeq2 lfcShrink() usage of coef vs. usage of contrast
Comment: Using Age or other numerical variable to model expression in deseq2
Comment: Using Age or other numerical variable to model expression in deseq2
Answer: Using Age or other numerical variable to model expression in deseq2
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