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annotationhubdata
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AnnotationHub data for Mus musculus seems to be missing, while previously it was there
tximeta
AnnotationHub
AnnotationHubData
6 months ago
Thon
• 0
0
votes
0
replies
388
views
Getting the exon co-ordinates and location
exon
AnnotationHubData
12 months ago
mahima.g
• 0
0
votes
2
replies
1.0k
views
How to fix warning in makeTxDbFromGFF() when using Gencode M30 (mouse)?
GenomicFeatures
AnnotationHubData
tximeta
updated 19 months ago by
Michael Love
42k • written 19 months ago by
Pratik Mehta
▴ 10
0
votes
13
replies
2.9k
views
EnrichGO not working with db created from annotationhub
clusterProfiler
AnnotationHubData
GO
updated 24 months ago by
Guido Hooiveld
★ 3.9k • written 24 months ago by
Lucía
▴ 10
3
votes
3
replies
1.2k
views
I can't run PhyloProfile
AnnotationHubData
PhyloProfile
2.0 years ago • updated 24 months ago
S.t
▴ 10
3
votes
8
replies
2.6k
views
AnnotationForge::makeOrgPackage GO Ids mistake
AnnotationHubData
AnnotationForge
2.0 years ago
Saber_J
▴ 10
0
votes
1
reply
634
views
a BioC/R package that display the genome sequence/ mRNA exons/protein domains
AnnotationHubData
updated 3.5 years ago by
Kevin Blighe
★ 3.9k • written 3.5 years ago by
Bogdan
▴ 670
7 results • Page
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Comment: deseq2 results
by
swbarnes2
★ 1.4k
Ask the people who made the libraires if there was anything unusual in the QC of the outlier sample. Try to figure out what biologically …
Comment: Can't post a question containing code?
by
NATASHA
• 0
did you find a solution? I´m having the same problem
Comment: error
by
NATASHA
• 0
Please ignore, i didnt copy all the scrip
Comment: Extremely small p-values using Limma for proteomic data
by
James W. MacDonald
65k
If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>
Votes
A: AIC-like measure for DESeq2
Comment: Extremely small p-values using Limma for proteomic data
Comment: Log-cpm values from limma
Comment: Log-cpm values from limma
Comment: deseq2 results
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