Showing : arrayQuality • reset
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maQualityPlots: cannot coerce type 'S4' to vector of type 'double'
arrayQuality arrayQuality
10.3 years ago Saket Choudhary ▴ 130
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hexbin package installation probs
hexbin arrayQuality hexbin arrayQuality
updated 16.8 years ago by 66k • written 16.8 years ago by ▴ 230
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issue in arrayQuality package
hexbin arrayQuality hexbin arrayQuality
19.4 years ago Longsi Ran ▴ 30
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arrayQuality - maQualityPlots - Error: duplicate switch defaults: 'list(dev =...' and ''
arrayQuality arrayQuality
updated 12.7 years ago by 25k • written 12.7 years ago by ▴ 20
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arrayQuality - maQualityPlots - Error: duplicate switch defaults: 'list(dev =...' and ''
arrayQuality arrayQuality
13.0 years ago Fabio Liberante ▴ 20
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bugs in arrayQuality and marray
Normalization Biobase hexbin arrayQuality marray Normalization Biobase hexbin arrayQuality
18.5 years ago Paquet, Agnes ▴ 500
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arrayQuality: error from maQualityPlots
arrayQuality
updated 9.1 years ago by 50k • written 17.2 years ago by ▴ 60
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maQualityPlots on Mac
GUI arrayQuality marray GUI arrayQuality marray
updated 17.7 years ago by ▴ 300 • written 17.7 years ago by 16k
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Agilent CGH data
CGH arrayQuality marray CGH arrayQuality marray
updated 16.7 years ago by 21k • written 16.7 years ago by ▴ 230
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Error using arrayQuality and Agilent txt files
arrayQuality arrayQuality
13.6 years ago F. Javier López ▴ 30
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1.1k
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Error message when running arrayQuality 1.0.9
arrayQuality marray arrayQuality marray
updated 19.4 years ago by ▴ 500 • written 19.4 years ago by ▴ 10
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problem using arrayQuality package
Normalization limma arrayQuality Normalization limma arrayQuality
updated 19.3 years ago by ▴ 500 • written 19.3 years ago by ▴ 510
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marray and limma error with lmFit
Microarray Biobase DynDoc widgetTools limma arrayQuality marray convert Microarray DynDoc
17.1 years ago Paquet, Agnes ▴ 500
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problem with arrayQuality in OSX 10.5
arrayQuality arrayQuality
updated 16.2 years ago by ▴ 130 • written 16.2 years ago by ▴ 50
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ArrayQuality package bug in agQuality function - marray package
Microarray arrayQuality Microarray arrayQuality
15.9 years ago Marcus Davy ▴ 680
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maQualityPlots: cannot coerce type 'S4' to vector of type
arrayQuality arrayQualityMetrics arrayQuality arrayQualityMetrics
10.3 years ago Agnes Paquet ▴ 30
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978
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RE: maQualityPlots (qpHexbin) question
hexbin arrayQuality hexbin arrayQuality
19.0 years ago Paquet, Agnes ▴ 500
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1
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890
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Questions on arrayQuality
Cancer arrayQuality Cancer arrayQuality
updated 19.9 years ago by ▴ 500 • written 19.9 years ago by ★ 2.0k
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MEEBO-tool in arrayQuality
GO arrayQuality GO arrayQuality
18.1 years ago Paquet, Agnes ▴ 500
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876
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can't get release hexbin source package
GO hexbin arrayQuality GO hexbin arrayQuality
19.5 years ago Darlene Goldstein ▴ 230
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857
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maQualityPlots (qpHexbin) question
hexbin arrayQuality hexbin arrayQuality
19.0 years ago Rob J Goedman ▴ 40
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801
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I would like to know how to run PRvQCHyb in arrayQuality
arrayQuality arrayQuality
17.2 years ago Wonjong Moon ▴ 80
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arrayQuality: Error: recursive default argument reference
arrayQuality arrayQuality
19.1 years ago vijayaraj nagarajan ▴ 80
23 results • Page 1 of 1
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Comment: Ensembl plants at annotationHub? by Johannes Rainer ★ 2.0k
You can get the `EnsDb` EnsDb.Taestivum.v112.sqlite (for Ensembl 112/ ensemblgenomes 59) [here](https://www.dropbox.com/sh/msic0luivbldmb7/…
Comment: Errors in chromosome annotation-biomaRt by blackwidowzzz • 0
I recommend using a different dataset specific to your rat genome assembly version 8. You can search for available datasets within Ensembl …
Answer: Errors in chromosome annotation-biomaRt by James W. MacDonald 66k
If you are just using HGNC symbols for the lookup, and you are trying to get NCBI IDs, then I wouldn't use `biomaRt` because it's based on …
Comment: Help with ENmix readidat by James W. MacDonald 66k
Please don't add to posts from two years ago. Instead make a new post. Also, please read the help page for `readidat`. The only reason to …
Comment: LRT, more than two conditions and pairwise comparisons by James W. MacDonald 66k
In that case, probably easiest to subset to the groups being compared.
Votes
Answer: Error retrieving ensembl gene id using biomaRt...
Comment: LRT, more than two conditions and pairwise comparisons
Answer: Control group between 2 batches have different expression in RNAseq data
Answer: How to remove batch effect to combine RNAseq data from 2 different experiments?
Comment: DESeq2- Mysterious interaction suppresses DEGs
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