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bioconductor3.11
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Can't Download DESeq2 Package (Ubuntu 20.04; R 4.0.1; BioConductor 3.11)
deseq2
install
r4.0
bioconductor3.11
ubuntu20.04
4.4 years ago
ruwaa.ibrahem
• 0
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Comment: biomaRt rnorvegicus_gene_ensembl not available anymore
by
Mike Smith
★ 6.6k
Unfortunately I received this update from the Ensembl Helpdesk on 2024-11-14: > Unfortunately, the fix is taking longer than expected and …
Comment: Bioconductor 3.18 is Released!
by
thelmatertl
• 0
This is a release that expresses gratitude to the developers and community members for their contributions and the new features enhance the…
Comment: ColData and ERROR: rows did not converge in beta, labelled in mcols(object)$beta
by
daniela.gutierrezandrade
• 0
Hello, I am running into a similar issue. After setting the design, at the beginning of the analysis I filter rows with low counts. d…
Comment: Limma- Print-tip loess normalisation-printer layout information does not match M
by
dseauer
• 0
Thank you so much for all of your help! I really appreciate it!
Comment: Limma- Print-tip loess normalisation-printer layout information does not match M
by
Gordon Smyth
51k
Thanks for extra info, but be careful that the Bioconductor support site requires code to be an markdown format. Copying code with prompts …
Votes
A: Recommendations for combining multiple 10x runs into one SingleCellExperiment
Answer: Handling biological replicates in DESeq2
Comment: biomaRt rnorvegicus_gene_ensembl not available anymore
biomaRt rnorvegicus_gene_ensembl not available anymore
A: Does edgeR need to specify reference group?
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