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biocworkflowtools
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Export sample data to excel after taxonamy assignment
BiocWorkflowTools
3.4 years ago
c.poulton
• 0
0
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0
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620
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Author footnotes in BiocWorkflowTools::f1000_article template
BiocWorkflowTools
rmarkdown
3.9 years ago
helucro
▴ 70
2
votes
6
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974
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Multiple problems with BiocWorkflowTools
BiocWorkflowTools
updated 4.2 years ago by
Mike Smith
★ 6.5k • written 4.2 years ago by
alan.ocallaghan
▴ 160
1
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4
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1.5k
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Does BiocWorkflowTools package generate F1000Reseach/Bioconductor-stype PDF at once?
workflows
biocworkflowtools
bioconductor
5.9 years ago
Koki
▴ 10
3
votes
1
reply
668
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LaTeX Error with BiocWorkflowTools
biocworkflowtools
updated 6.0 years ago by
Mike Smith
★ 6.5k • written 6.0 years ago by
shbrief
▴ 20
3
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2
replies
1.7k
views
Issue with pandoc-citeproc when rendering the f1000 article Rmd file from BiocWorkFlowTools
BiocWorkflowTools
rmarkdown
updated 6.9 years ago by
Andrzej Oleś
▴ 750 • written 6.9 years ago by
Leonardo Collado Torres
★ 1.0k
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Comment: fgsea significant result
by
Chris
• 0
Thanks ATpoint! Setting a fixed seed can reproduce the same result. However, if someone else analyze the same data with different seed, the…
Comment: SGSeq: moving toward diffex from SGSeq analysis
by
Sara
• 0
Thank you for your response. I have another question about saving the sgvc result as a CSV file. I would appreciate your help, please. ``` …
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I tried different block lengths first and considered 100000 to be ideal because of the almost similar inter-range distance. S1= bootRange…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
The segmentation and block length are key parameters. We recommend for example blocks of length ~500kb. It would help if you would post yo…
Answer: Handling multiple differential expression comparisons
by
Michael Love
41k
It's typical that results are presented with each group having its own FDR control. So presenting each comparison with the adjusted p-va…
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Answer: fgsea significant result
Answer: fgsea significant result
package goseq seems to be not available on the latest version of R
package goseq seems to be not available on the latest version of R
Print Differentially Expressed Exons From Dexseq Results
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