updated 3.2 years ago by
James W. MacDonald
62k
•
written 3.2 years ago by
moldach
▴
20
0
votes
2
replies
498
views
0
votes
0
replies
775
views
7.0 years ago
kevin.rue
▴
320
4
votes
6
replies
3.1k
views
updated 8.5 years ago by
Dan Tenenbaum
★
8.2k
•
written 8.5 years ago by
ville.q.rantanen
•
0
0
votes
2
replies
1.4k
views
updated 8.8 years ago by
Tengfei Yin
▴
490
•
written 8.8 years ago by
Laurent Gatto
1.6k
0
votes
2
replies
1.5k
views
updated 9.6 years ago by
Tengfei Yin
▴
490
•
written 9.6 years ago by
Malcolm Cook
★
1.6k
Recent ...
Replies
Answer: DESeq2 or edgeR for Presence and Absence of Proteins
by
ATpoint
★
2.8k
No, both tools expect count data with certain distributional assumptions which are not satisfied by binary data.
Since you're a master …
Comment: Visualization of negative log CPM values
by
Gordon Smyth
47k
Sorry, but some of the things you say are not correct.
> compound B has 2 statistically significant genes that are up-regulated
No, there…
Comment: Visualization of negative log CPM values
by
Sabiha
▴
10
@atpoint OK, are you referring to the `log2(cpm+1)` or `log2(tpm+1)`
Comment: Visualization of negative log CPM values
by
Sabiha
▴
10
@gordonsmyth noted. Related to the graphs above, the table below is the output from `limma`, and compound B has 2 statistically significant…
Awards
• All
Popular Question to
ioannis.vardaxis
▴
30
Scholar to
Erqiang Hu
▴
50
Popular Question to
Matthew Thornton
▴
350
Scholar to
Hervé Pagès
16k
Popular Question to
Habil Zare
▴
170
Locations
• All
France/Marseille/Inserm, 59 minutes ago
Germany, 1 hour ago
Israel, 2 hours ago
Melbourne, Australia, 3 hours ago
The city by the bay, 3 hours ago
France/Marseille/Inserm, 59 minutes ago
Germany, 1 hour ago
Israel, 2 hours ago
Melbourne, Australia, 3 hours ago
The city by the bay, 3 hours ago
Traffic: 228 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6