Bioconductor Blocked design

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EdgeR multiple factor design blocked design

updated 6.4 years ago by Aaron Lun ★ 28k • written 6.4 years ago by D ▴ 10

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voom blocked design limma

updated 6.9 years ago by Gordon Smyth 52k • written 6.9 years ago by raf4 ▴ 30

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Answer: Annotation package for Manduca sexta by shepherl 4.1k

Yes through the AnnotationHub ``` > library(AnnotationHub) > ah = AnnotationHub() snapshotDate(): 2024-10-28 > query(ah, "Manduc…

Comment: Ensembl site unresponsive via biomaRt by mdeea123 ▴ 10

Thanks for the link. I will contact them directly, I wish they had some sort of status page.

Comment: Ensembl site unresponsive via biomaRt by Mike Smith ★ 6.6k

I think this is an unrelated issue. The original post includes the message `Error: 'curl_parse_url' is not an exported object from 'namesp…

Comment: pairedGSEA input files by shdam ▴ 10

Hi Sara, Apologies for the slow response! James is exactly right. Both `salmon` and `kallisto` can produce transcript counts, if you map …

Comment: Unused arguments error without used arguments in GSVA? by michaelarringtony • 0

Perhaps from a direct call to gsva without the parameter [Sprunki Pyramixed][1] object [1]: https://pyramixed.io/

Votes

clusterProfiler-GO enrichment Error

A: Machine learning in R book

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