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Diffbind ATAC batch correction blocking factor

updated 5.7 years ago by Rory Stark ★ 5.2k • written 5.7 years ago by rm1238 • 0

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You shouldn't need to run `DESeq` on the test data, or manually compute normalization factors. ``` dds_test <- ... # create object dds_te…

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We have made significant changes to how featureCounts annotates junctions detected in read mapping results. These updates are included in t…

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I would like to share my own understanding: in single-cell RNA sequencing (scRNA-seq), batch correction is solely intended to identify the …

Comment: DiffBind can't find a DAR by Mengjun • 0

Additionally, i checked my bigwig in igv, it shows that the ctrl_1 is more like ko_1, and ctrl_2's track is more like ko_2's track. Did an…

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Great news about the European Bioconductor Conference 2023 planning! As someone who enjoys statistical computing and bioinformatics, I'm ex…

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