Bioconductor Cage

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cager cage ctss

updated 3.4 years ago by Charles Plessy ▴ 180 • written 4.2 years ago by sarac ▴ 20

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653

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CAGEfightR CAGE

updated 4.2 years ago by maltethodberg ▴ 170 • written 4.2 years ago by sarac ▴ 20

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592

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CAGEFightR CAGE CTSS

4.4 years ago July • 0

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733

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TSS promoter cage cager

4.9 years ago bharata1803 ▴ 50

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1.9k

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CAGEr cage

updated 2.1 years ago by jingxian.18 • 0 • written 7.6 years ago by Vivek.b ▴ 100

5 results • Page 1 of 1

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Comment: Exporting DESeq2 filtered results by James W. MacDonald 63k

I am interested to know what part of my response you found rude. I asked nicely that you don't add to ancient posts, said your post isn't r…

Comment: Speeding up of DelayedArray::write_block() by Hervé Pagès 16k

> I can imagine writing a sparse high-dimensional array in HDF5, but I'm still not sure how to implement the part where it is read and imme…

Comment: Speeding up of DelayedArray::write_block() by Hervé Pagès 16k

Not in BioC 3.18. At some point (e.g. in 6 months) they will be deprecated, then 6 months later (i.e. in 1 year) they will be defunct, then…

Comment: Biostrings error at retrieving protein sequences by Hervé Pagès 16k

Yes, but you need to put the clean names back on the AAStringSet object: ``` names(protein_sequences) <- gsub(" .*", "", names(protein_sequ…

Comment: Exporting DESeq2 filtered results by camillab. ▴ 10

thanks! I didn't`t notice that. I will cancel it now!

Votes

Unclear of calculating correlations with case+control samples together

Answer: Error MakeOrgPackagefromNCBI

Batch Effect in DESeq2, how to control, how to remove it, how to address biological question

A: BiomaRt Arabidopsis genome unavailable

Answer: enrichKEGG

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