Bioconductor Promoter

Showing : promoter • reset

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1.3k

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promoter GenomicRanges rtracklayer GRanges

3.3 years ago • updated 3.2 years ago Arslan • 0

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1.4k

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promoter

updated 4.6 years ago by Hervé Pagès 16k • written 4.6 years ago by Charles Plessy ▴ 180

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1.4k

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r granges promoter

updated 5.8 years ago by Hervé Pagès 16k • written 5.8 years ago by eggrandio • 0

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1.1k

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TSS promoter cage cager

6.0 years ago bharata1803 ▴ 60

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1.5k

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genomicranges genomicfeatures promoter upstream_flank

6.2 years ago Wojeff • 0

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2.2k

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repitools promoter tss annotation

6.7 years ago Ryan C. Thompson ★ 7.9k

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2.2k

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TxDB genomicfeatures promoter getpromoterseq

updated 6.8 years ago by Hervé Pagès 16k • written 6.8 years ago by rbenel ▴ 40

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1.3k

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dexseq promoter utr

updated 8.5 years ago by Alejandro Reyes ★ 1.9k • written 8.5 years ago by joan.hooper • 0

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2.1k

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bsgenome txdb promoter

updated 8.8 years ago by Martin Morgan 25k • written 8.8 years ago by sekawaiwai2006 ▴ 20

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3.0k

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promoter granges refseq ucsc organismdb

updated 9.0 years ago by Robert Castelo ★ 3.4k • written 9.0 years ago by efoss ▴ 10

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1.5k

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VariantAnnotation promoter drosophila melanogaster

updated 9.9 years ago by Valerie Obenchain ★ 6.8k • written 9.9 years ago by lidia.mateo ▴ 30

11 results • Page 1 of 1

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Comment: Running multiple KNN queries in parallel by SamGG ▴ 360

Thank you for your detailed answer, I appreciate it and your work.

Answer: Running multiple KNN queries in parallel by Aaron Lun ★ 28k

That is correct - you can't pass the prebuilt objects to different processes. Maybe `MulticoreParam()` might work on POSIX systems but I'm …

Answer: RSubread output significantly different from bash Subread output by Gordon Smyth 52k

The difference (as ATpoint has correctly pointed out) is that Rsubread::featureCounts counts multi-mapping reads by default whereas the com…

Answer: Deseq2 Error in solve.default(qr.R(qrx)) : 'a' (1 x 0) must be square by Michael Love 43k

I would check the rank of your model matrix, and perhaps meet with a local statistician who can help you create an appropriate design matri…

Comment: sva: get a sv for RIN scores by gabriel.hoffman ▴ 170

Agreed. I'll add that with small sample size, a covariate can explain some fraction of expression variation even under the null.

Votes

Answer: Running multiple KNN queries in parallel

Answer: RSubread output significantly different from bash Subread output

Answer: How to annotate a limma Elist raw class object with an annotation file

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Teacher to Michael Love 43k

Popular Question to Dario Strbenac ★ 1.5k

Scholar to ATpoint ★ 4.6k