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cellmix
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Extracting results from a DSA fit to expression data with only a gene markers list
cellmix
6.5 years ago
nrubinstein
• 0
3
votes
3
replies
1.8k
views
Error running CellMix SampleAnalysis vignette
software error
cellmix
vignette
expressionset
7.3 years ago
gabor.halasz
• 0
1
vote
1
reply
1.9k
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CellMix compare results to CellCODE
cellmix
cellcode
updated 8.0 years ago by
Steve Lianoglou
★ 13k • written 8.0 years ago by
christopher.clarskon15
▴ 20
0
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0
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854
views
Coefmap plot without the sorting
coefmap
cellmix
8.3 years ago
thrabe
• 0
0
votes
1
reply
863
views
Access MarkerList attribute
cellmix
8.3 years ago
thrabe
• 0
0
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0
replies
970
views
basismarkermap scaling fails for large data
Cellmix
8.3 years ago
thrabe
• 0
0
votes
0
replies
1.6k
views
CellMix - Custom matrix with Abbas signature
deconvolution
cellmix
8.9 years ago
carleshf
▴ 10
7 results • Page
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Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
ATpoint
★ 4.0k
I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…
Answer: Improving the design matrices vignette in RNAseq123
by
Gordon Smyth
50k
Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Votes
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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JKim
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Gordon Smyth
50k
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Chris
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