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vignette
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Excluding samples as referenced in SummarizedExperiment vignette
SummarizedExperiment
vignette
5 months ago
BioInfoBeginnerrr
• 0
4
votes
5
replies
1.9k
views
Error in the vignette for biomaRt (when accessing an ensembl archive)
biomaRt
vignette
updated 16 months ago by
ashleymaeconard
▴ 10 • written 2.8 years ago by
Russ Hyde
▴ 10
2
votes
2
replies
487
views
How to write the installation section in the vignette of a package that has not been sent into Bioconductor yet
newpackage
vignette
installation
updated 2.8 years ago by
shepherl
3.2k • written 2.8 years ago by
Krutik Patel
▴ 10
0
votes
1
reply
629
views
Error executing flowcore vignette
flowcore
vignette
software error
updated 4.9 years ago by
Jiang, Mike
★ 1.3k • written 4.9 years ago by
Robert Baer
▴ 70
7
votes
2
replies
818
views
Duplicated author affiliations in BiocStyle-based HTML document
biocstyle
vignette
updated 5.1 years ago by
Andrzej Oleś
▴ 750 • written 5.1 years ago by
Aaron Lun
★ 27k
0
votes
3
replies
1.8k
views
unable to connect to 'string.uzh.ch' on port 80
STRINGdb
vignette
updated 5.3 years ago by
Gregor Rot
▴ 10 • written 5.3 years ago by
mwinerip
• 0
3
votes
3
replies
1.4k
views
Error running CellMix SampleAnalysis vignette
software error
cellmix
vignette
expressionset
5.6 years ago
gabor.halasz
• 0
2
votes
3
replies
1.7k
views
No color support in ggbio for autoplot
ggbio
autoplot
color
vignette
updated 6.5 years ago by
aaron
▴ 10 • written 6.5 years ago by
timothypyork
• 0
1
vote
2
replies
1.1k
views
GitHub Continuous Integration, unit-tests, vignettes: R Packaging
github
vignette
test
developers
updated 6.6 years ago by
Dan Tenenbaum
★ 8.2k • written 6.6 years ago by
anthonycolombo60
• 0
3
votes
2
replies
902
views
question regarding embedding images in vignette when creating bioconductor package
vignette
updated 7.0 years ago by
Dan Tenenbaum
★ 8.2k • written 7.0 years ago by
K
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Answer: spot- vs cell-level data access
by
Leonardo Collado Torres
▴ 980
Hi, The `SingleCellExperiment` object you can download with `fetch_data(type = "sce")` pre-dates the creation of `SpatialExperiment`. No…
Answer: unable to install.packages("spatialLIBD")
by
Leonardo Collado Torres
▴ 980
Hi @kstern, Thank you for your interest in `spatialLIBD`. You will still need the package in order to re-cast the object into a `Spatia…
Comment: Question regarding averaging DESeq2 results.
by
e.v.egeland
• 0
Thanks for your quick reply, Wolfgang. Your answer does cover the essence of my question. I did initially apply both approaches discussed …
Comment: unable to install.packages("spatialLIBD")
by
shepherl
3.2k
I guess it depends on what you mean by only getting the datasets? You can clone the package with `git clone https://git.bioconductor.org/p…
Comment: Which is the best type of data for correlation or survival analysis
by
Yang Shi
• 0
Thanks for your reply and your excellent package! Could you please tell me the **difference bwtween vst transformed data and the "vtd" base…
Votes
C: No genes found in universe : goana error
A: No genes found in universe : goana error
No genes found in universe : goana error
Answer: Pathview unable to download pathways
Comment: Which is the best type of data for correlation or survival analysis
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