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cghcall
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0
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757
views
How to combine CGHcall objects
cghcall
r
cgh
copy number
7.0 years ago
kitcurtius
• 0
0
votes
0
replies
1.2k
views
CGHCall problems
aCGH
probe
DNAcopy
aCGH
CGHcall
aCGH
probe
DNAcopy
aCGH
CGHcall
10.7 years ago
Guest User
★ 13k
0
votes
4
replies
1.4k
views
CGHcall and Normalization
Normalization
CGHcall
Normalization
CGHcall
12.9 years ago
Salih Tuna
▴ 30
0
votes
3
replies
1.6k
views
CGHcall
CGHcall
CGHcall
updated 12.9 years ago by
Sean Davis
21k • written 12.9 years ago by
Yan Jiao
▴ 140
0
votes
0
replies
903
views
CGHcall problem
CGH
CGHcall
CGH
CGHcall
14.0 years ago
Erik Dassi
▴ 10
0
votes
0
replies
1.1k
views
DNAcopy
aCGH
impute
DNAcopy
aCGH
snapCGH
CGHcall
aCGH
impute
DNAcopy
aCGH
snapCGH
CGHcall
14.3 years ago
Daniel Rico
▴ 110
0
votes
0
replies
1.2k
views
CGHregions error
Cancer
CGHcall
CGHregions
Cancer
CGHcall
CGHregions
14.8 years ago
Daniel Rico
▴ 110
0
votes
2
replies
1.2k
views
CGHcall error
aCGH
Normalization
Cancer
aCGH
CGHcall
copynumber
aCGH
Normalization
Cancer
aCGH
CGHcall
updated 15.6 years ago by
Daniel Rico
▴ 110 • written 15.6 years ago by
James Morris
▴ 40
0
votes
3
replies
1.6k
views
CGHcall error
Cancer
Organism
MANOR
oligo
CGHcall
BAC
Cancer
Organism
MANOR
oligo
CGHcall
BAC
updated 16.2 years ago by
Henrik Bengtsson
★ 2.4k • written 16.2 years ago by
Daniel Rico
▴ 110
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Comment: log2FoldChange value is way too different when compared with counts(dds)
by
Michael Love
41k
But just to be clear, this is not the same as regressing out batch from the VST (approx log transformed): ``` limma::removeBatchEffect(cou…
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
HAK
• 0
Thank you for the explanation, probably my brain just needed to accumulate enough info to understand what you are saying, but I finally got…
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
ATpoint
★ 4.1k
Here the error probably means that you habe genes where expression scross all samples is the same. Rowscaling is value minus mean divided b…
Comment: Store output of matchPWM()
by
James W. MacDonald
65k
Here's a self contained reproducible example, using part of the example in `?matchPWM` ``` > library(Biostrings) > data(HNF4alpha) > libr…
Comment: DEseq2 coefficient
by
JKim
• 0
Hi Dr. Love, I'm sorry to ask another question to my old post. If the design isn't balanced, the interpretation of coefficients will be…
Votes
SPIA plotP giving error
Answer: Fold change calculation in Diffbind vs. DESEQ2?
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
C: Extremely big genes in annotation TxDb packages
Make custom Txdb class objects from Txdb
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