Showing : copy number • reset
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cn.MOPS output - mean/median of what?
cn.MOPS CNV copy number
19 months ago liorglic ▴ 10
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how to analyze CNV data
copy number
4.2 years ago mms140130 • 0
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396
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How to combine CGHcall objects
cghcall r cgh copy number
4.3 years ago kitcurtius • 0
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708
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Batch Correction and Normalization for champ.CNA
bioconductor ChAMP copy number batch effect normalization
updated 4.5 years ago by ▴ 10 • written 4.5 years ago by • 0
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champ.CNA error (Error in sort(abs(diff(genomdat)))[1:n.keep])
ChAMP champ copy number
4.6 years ago apmishra • 0
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Calling amplifications and deletions from CopywriteR output
CopywriteR copy number
updated 5.6 years ago by 170 • written 5.6 years ago by • 0
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Why are the raw copy numbers maxed at 5 and minned at 0 ?
crlmm copy number
6.5 years ago kforner • 0
7 results • Page 1 of 1
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Comment: Diffbind dba.plotProfile attempt to select less than one element in OneIndex by bhanratt • 0
``` > DBA 10 Samples, 31953 sites in matrix: ID Tissue Factor Condition Replicate Reads FRiP 1 58 1 H3K4me3 AD …
Answer: Warning messages on Apple M1 BigSur by Vincent J. Carey, Jr. 6.5k
We are not producing M1 binaries at this time. If you use the intel version of R under Rosetta 2 you can use the intel mac binaries.
Comment: Issue::DesignPrimers DECIPHER by slwmartin • 0
Hey, I'm having this issue too. I've tried reinstalling using Conda a few times without luck. Did you reinstall with Conda or from the tar …
Comment: Log fold change interpretation of time series with Wald test by jd348 • 0
So would you recommend still using Log2fold change as a measurement for effect size?
Answer: Error in `*tmp*`$samples : $ operator is invalid for atomic vectors by James W. MacDonald 58k
I believe you want ``` > x <- as.matrix(read.delim("E:/bioinformatic/RNAseq/GSE168008_raw_count.txt", sep ="" ,row.names = 1)) > sampl…
Votes
Comment: Use of coef() as a measure of effect size in a multiple regression using DESeq2
Answer: Log fold change interpretation of time series with Wald test
A: gviz: name of tracks disappeas
Answer: Degust: what normalization method does it use
Answer: ylim and xlim in Enhanced Volcano
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