Showing : copy number • reset
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cn.MOPS output - mean/median of what?
cn.MOPS CNV copy number
15 months ago liorglic ▴ 10
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985
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how to analyze CNV data
copy number
3.9 years ago mms140130 • 0
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355
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How to combine CGHcall objects
cghcall r cgh copy number
4.0 years ago kitcurtius • 0
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1
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625
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Batch Correction and Normalization for champ.CNA
bioconductor ChAMP copy number batch effect normalization
updated 4.2 years ago by ▴ 10 • written 4.2 years ago by • 0
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champ.CNA error (Error in sort(abs(diff(genomdat)))[1:n.keep])
ChAMP champ copy number
4.3 years ago apmishra • 0
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1.3k
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Calling amplifications and deletions from CopywriteR output
CopywriteR copy number
updated 5.2 years ago by 170 • written 5.3 years ago by • 0
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Why are the raw copy numbers maxed at 5 and minned at 0 ?
crlmm copy number
6.1 years ago kforner • 0
7 results • Page 1 of 1
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Answer: erorr in normalization with DiffBind: pv$binding[, colnum] <- pv$peaks[[i]]$RPKM by Rory Stark ★ 3.9k
I have confirmed that this is a bug. The fix will appear in the next release (Bioconductor 2.13/DiffBind_3.2.0) later this week as it is to…
Answer: MultiAssayExperiment sampleMap Requirement for All Assays by Marcel Ramos 500
Hi Dario, > Is it possible to avoid specifying a `sampleMap` row for every column in every assay? No, we track all the columns in th…
Comment: Mapping nothing when doing Enrichment Analysis of the TAIR using enrichGO in R by dailing57 • 0
Thank you for your advice! I successfully shoot the trouble!
Answer: Mapping nothing when doing Enrichment Analysis of the TAIR using enrichGO in R by Guido Hooiveld ★ 2.9k
The absence of errors indicate that the analysis as such went fine. The fact that no enriched GO terms were found thus indicate that there …
Comment: Bioconductor Release AMI's by Vincent J. Carey, Jr. 6.4k
Just as an FYI, the documentation and dockerfiles at [https://github.com/bioconductor/bioconductor_docker](https://github.com/bioconductor/…
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Comment: Controlling for Batch Effect and Grouping in DESEQ2
Answer: Mapping nothing when doing Enrichment Analysis of the TAIR using enrichGO in R
Answer: Mapping nothing when doing Enrichment Analysis of the TAIR using enrichGO in R
A: help with clusterProfiler enricher function
ASpli: jCounts() Error in av[at] <- a[at] : NAs are not allowed in subscripted assignments
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