Showing : copy number • reset
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cn.MOPS output - mean/median of what?
cn.MOPS CNV copy number
4.9 years ago liorglic ▴ 10
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1.7k
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how to analyze CNV data
copy number
7.5 years ago mms140130 • 0
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895
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How to combine CGHcall objects
cghcall r cgh copy number
7.7 years ago kitcurtius • 0
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1.5k
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Batch Correction and Normalization for champ.CNA
bioconductor ChAMP copy number batch effect normalization
updated 7.9 years ago by ▴ 10 • written 7.9 years ago by • 0
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champ.CNA error (Error in sort(abs(diff(genomdat)))[1:n.keep])
ChAMP champ copy number
8.0 years ago apmishra • 0
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Calling amplifications and deletions from CopywriteR output
CopywriteR copy number
updated 8.9 years ago by ▴ 170 • written 9.0 years ago by • 0
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Why are the raw copy numbers maxed at 5 and minned at 0 ?
crlmm copy number
9.8 years ago kforner • 0
7 results • Page 1 of 1
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Answer: Curiously shaped volcano plot with using oarfish + swish to do differential gene by Michael Love 43k
See swish vignette, these are explained.
Comment: Problems with oarfish + tximport + swish by Michael Love 43k
Great thanks for posting the issue and sticking with it Annaleigh
Comment: Problems with oarfish + tximport + swish by brown.annaleigh • 0
Awesome possum! Update works!! Thank you so much for the help and guidance!
Comment: Postdoctoral Researcher in Spatial Gene Regulatory Networks underlying Stomatal by iqratechnology4 • 0
Iqra Technology is IT Solutions and Services Company. We are salesforce and Microsoft partner company. https://iqratechnology.com/
Comment: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt? by James W. MacDonald 67k
> BTW, shouldn't you be using keep.lib.sizes = F and re-do the calcNormFactors() after filtering of the dglst low-expression ENSGs, as Gord…
Votes
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Answer: Limma Interaction Effect with Covariates
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