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Answer: Design and contrast matrices for analyzing the effect of two factors of interest
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> In a typical regression, I would just add them to the model when estimating my coefficients of interest
Why not do the same with limma? …
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> So you think my method in TPM normalization that I introduced above is not good?
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Package ‘FField’ was removed from the CRAN repository.[enter link description here][1]
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Ruggero
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This solved the error, in case someone else is having compilation errors from installing RSQllite:
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A while ago a faced the same for another non-model organism. I was able to get it working using a 'hack'.
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