Bioconductor Createset

Showing : createset • reset

0

votes

0

replies

879

views

medip-seq createset

updated 5.9 years ago by Bioconductor Community 0 • written 6.0 years ago by oussama.badad • 0

0

votes

2

replies

1.3k

views

medips createset

updated 6.0 years ago by Lukas Chavez ▴ 570 • written 6.0 years ago by oussama.badad • 0

2

votes

13

replies

2.7k

views

medips createset

9.1 years ago • updated 9.0 years ago Vanilla • 0

3 results • Page 1 of 1

Recent ...

Replies

Comment: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac ( by Paul • 0

This is the traceback I got after running AddMotifs if this is informative? ``` 23: stop(wmsg("trying to load regions beyond the boundaries…

Comment: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac ( by James W. MacDonald 67k

You will probably have to ask the Signac people. I don't know exactly what is going on under the hood for `AddMotif`, but the `EnsDb` seems…

Comment: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac ( by Paul • 0

Unfortunately I've updated my code with the newest GRCm39 genome, and yet I am still getting the same error.... Is there anything else I ca…

Comment: WGCNA with TPM tables by ATpoint ★ 4.5k

WGCNA is not a Bioconductor package, but generally: If you want to do serious analysis then find the raw data. There is no guarantee what …

Answer: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac ( by James W. MacDonald 67k

The `EnsDb.Mmusculus.v79` package is mm38, not mm39. If you want a current `EnsDb`, use `AnnotationHub` ``` > library(AnnotationHub) >…

Votes

Answer: ANOVA like approach of edgeR

A: ANOVA-like test with edgeR

Awards • All