updated 2.1 years ago by
Guido Hooiveld
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written 2.1 years ago by
keremwai
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Comment: errors in annotation
by
James W. MacDonald
60k
If you go to NCBI and the data appear to be correct, then they have evidently already fixed the errors you have found. The data we download…
Comment: How should I set my eps value in cluster profiler?
by
Guido Hooiveld
★
3.3k
Under the hood `clusterProfiler` makes use of a (fast) GSEA algorithm implemented in the package `fgsea` (function `fgseaMultilevel`). The …
Comment: Error using ChAMP SVD analysis
by
CristEin
•
0
In fact, I found that the author may have caused the problem
class(myNorm) %>% length() #equals 2
class(myNorm) == "data.…
Comment: Error in Create switchAnalyzeRlist
by
k.vitting.seerup
▴
120
Oh sorry I missed the species. Yes they also match for chicken :-) (both being called "ENSGALT..."). The other is from NCBI
Comment: Error in Create switchAnalyzeRlist
by
bpshtiwan
▴
10
Ok, have you looked cDNA fasta file for Chicken (maternal Broiler)
Gallus gallus? I am using Kallisto for alignment and quantification. He…
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