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How to set threshold of padj value in DeSeq2
DESeq2 padj default
updated 8 months ago by 63k • written 8 months ago by • 0
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update all/some/none how to set default to "update all"
biocLite update all default ask
updated 4.6 years ago by ▴ 30 • written 4.6 years ago by ▴ 10
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Comment: Biostrings error at retrieving protein sequences by James W. MacDonald 63k
It depends on what kind of whitespace it is. If the whitespace is just a space, then it will work. But if it's a tab, it won't. ``` > gsub…
Comment: Biostrings error at retrieving protein sequences by nromerov • 0
If i write it like ```r gsub(" .*", "", names(protein_sequences)) ``` it will delet all the extra information if it is on the AAString…
Comment: bug in block.plsda from mixOmics? by Lluís Revilla Sancho ▴ 720
Oh, sorry for the noise, I see that just after Bioconductor 3.16 the bug is fixed in both 3.17 and in devel. Thanks for checking.
Answer: Mixed up sample info with plotPCA by Michael Love 40k
I can already tell there is code you aren't showing. For example, your `pcaData` has a variable 'group' that isn't in the previous sample i…
Comment: Biostrings error at retrieving protein sequences by nromerov • 0
Thaks a lot for your help
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Answer: Mouse to Human Genes using bioconductor
Mouse to Human Genes using bioconductor
Answer: Biostrings error at retrieving protein sequences
Answer: Biostrings error at retrieving protein sequences
Answer: How do I merge a list of GRanges?
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