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diffBind
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0
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48
views
Difference in Contrast in DiffBind
DiffBind
6 days ago
zzrammal
• 0
0
votes
0
replies
100
views
need help with Diffbind multiple groups
DiffBind
ChIPSeqData
14 days ago
Dinesh
• 0
0
votes
0
replies
125
views
dba.plotProfile() plotting and interpretation
DiffBind
18 days ago
Henry
▴ 10
0
votes
0
replies
97
views
DiffBind: no peaks in DBA object
DiffBind
macs2
chipseq
19 days ago
yvonneh
• 0
0
votes
0
replies
89
views
How to create consensus peak sets for each group to use in DiffBind?
DiffBind
19 days ago
Ian D.
▴ 70
0
votes
4
replies
381
views
More regions in union when increasing DBA$config$mergeOverlap
DiffBind
updated 9 days ago by
Ziliang
• 0 • written 20 days ago by
Ian D.
▴ 70
1
vote
1
reply
161
views
Fold change calculation in Diffbind vs. DESEQ2?
DiffBind
ChIPSeqData
DESeq2
updated 21 days ago by
Michael Love
42k • written 21 days ago by
marcusn
• 0
0
votes
1
reply
175
views
ATACseq merge peaks
DiffBind
updated 25 days ago by
ATpoint
★ 4.1k • written 27 days ago by
Shloka
• 0
8 results • Page
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Well it turns out there is a typo in the manifest file name. This particular issue is resolved by correcting the typo. A new error now …
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We are still waiting for the goseq to respond to our requests but will take action next week if it is not resolved. ChAMP is currently una…
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baptiste.bidon
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After facing the same problem, I realise that you can direct your plot in the matrix with the *par()* option `par(..., mfg = c(1,2))`. If i…
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by
Tahirah
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Hello. Could you please share how you managed to install ChAMP in R 4.4.0? I also have R 4.4.0 and Bioconductor 3.19 version and ChAMP fail…
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how to control age and gender effect in expression data using DESeq2
Answer: Error retrieving ensembl gene id using biomaRt...
Comment: LRT, more than two conditions and pairwise comparisons
Answer: Control group between 2 batches have different expression in RNAseq data
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