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diffBind
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0
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50
views
Difference in Contrast in DiffBind
DiffBind
6 days ago
zzrammal
• 0
0
votes
0
replies
101
views
need help with Diffbind multiple groups
DiffBind
ChIPSeqData
15 days ago
Dinesh
• 0
0
votes
0
replies
125
views
dba.plotProfile() plotting and interpretation
DiffBind
18 days ago
Henry
▴ 10
0
votes
0
replies
97
views
DiffBind: no peaks in DBA object
DiffBind
macs2
chipseq
19 days ago
yvonneh
• 0
0
votes
0
replies
89
views
How to create consensus peak sets for each group to use in DiffBind?
DiffBind
19 days ago
Ian D.
▴ 70
0
votes
4
replies
381
views
More regions in union when increasing DBA$config$mergeOverlap
DiffBind
updated 10 days ago by
Ziliang
• 0 • written 20 days ago by
Ian D.
▴ 70
1
vote
1
reply
161
views
Fold change calculation in Diffbind vs. DESEQ2?
DiffBind
ChIPSeqData
DESeq2
updated 21 days ago by
Michael Love
42k • written 21 days ago by
marcusn
• 0
0
votes
1
reply
175
views
ATACseq merge peaks
DiffBind
updated 25 days ago by
ATpoint
★ 4.1k • written 27 days ago by
Shloka
• 0
8 results • Page
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Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Thank you so much!
Answer: recount3 problem downloading data from source sra
by
Leonardo Collado Torres
★ 1.0k
Hi, I wasn't able to reproduce the issue on both bioc 3.19 (current release version) and 3.18 (closer to your session info). My guess is…
Answer: Running ENmix with mouse methylation manifest: readidat error - Error in readman
by
minardsmitha
▴ 10
Well it turns out there is a typo in the manifest file name. This particular issue is resolved by correcting the typo. A new error now …
Answer: Documenting resources in an `ExperimentHub` package?
by
James W. MacDonald
66k
The easiest way to do that IMO is to use emacs/ESS (or I believe there is some newfangled thing called RStudio? Not personally familiar, bu…
Comment: ChAMP installation issue
by
shepherl
3.9k
We are still waiting for the goseq to respond to our requests but will take action next week if it is not resolved. ChAMP is currently una…
Votes
Answer: Identifying DEGs using limma - NanoString GeoMx-NGS RNA Expression Data
Comment: Ensembl plants at annotationHub?
how to control age and gender effect in expression data using DESeq2
Answer: Error retrieving ensembl gene id using biomaRt...
Comment: LRT, more than two conditions and pairwise comparisons
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