Bioconductor Dream

Showing : dream • reset

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1.1k

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variancePartition mixedmodel dream

12 months ago hayleyw • 0

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877

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RNAseq variancePartition edgeR dream

18 months ago DH • 0

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1.2k

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variancePa variancePartition limma-voom dream

updated 18 months ago by Gordon Smyth 51k • written 18 months ago by Le • 0

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2.8k

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dream variancePartition limma differential expression repeated measures

updated 4.9 years ago by Gordon Smyth 51k • written 4.9 years ago by hermidalc ▴ 20

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2.0k

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limma voom variancePartition dream

updated 4.9 years ago by gabriel.hoffman ▴ 160 • written 5.2 years ago by Ben ▴ 50

5 results • Page 1 of 1

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Comment: SingleR Label.Ont by Stepah • 0

[Aussie Play][1] cares about its Australian players by offering a safe and secure gaming experience where there is never a dull moment. The…

Comment: ensemblVEP deprecation and how to reproduce by Vincent J. Carey, Jr. 6.7k

What aspect of ensemblVEP are you looking for? The vignette https://bioconductor.org/packages/release/bioc/vignettes/VariantAnnotation/in…

Answer: Help with design matrix for RNA-seq data using edgeR by Gordon Smyth 51k

This forum is intended to help with software usage and syntax rather than to answer research questions, and your question is a definitely a…

Answer: [DESeq2] Normalization of External Test Dataset for Machine Learning (ML) Applic by Michael Love 42k

DESeq2 has a way of fixing the reference pseudo-sample used for normalization. In estimateSizeFactors man page, you will see an argument g…

Comment: [DESeq2] Normalization of External Test Dataset for Machine Learning (ML) Applic by Michael Love 42k

Sorry - I requested this to be posted here, I will answer.

Votes

Answer: Help with design matrix for RNA-seq data using edgeR

Answer: Should tSNE from biol. replicates look alike?

Comment: fgsea stuck in an infinite loop in the middle of the run

Answer: Empty Results from champ.DMP Despite Expected Output

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Scholar to James W. MacDonald 67k

Popular Question to Matthew Thornton ▴ 380