updated 7.2 years ago by
Monther Alhamdoosh
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updated 17 months ago by
James W. MacDonald
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written 17 months ago by
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Comment: accounting for vs. removing batch effects with DESeq2 in RNAseq analysis
by
Blair
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0
@[Sprunki][1] wrote: Please read the vignette and think about adhering to the author's best practice, which discusses batch impacts.
[1…
Comment: error in ChAMP loading file
by
81becky
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0
hi Giulia, it sounds like you're facing a frustating issue with your chAMP import. One common suggestion is to double-check your CSV fomat…
Answer: DESeq2 adujsted p-value cutoff seemingly not working
by
James W. MacDonald
68k
From `?results'
```
On p-values:
By default, independent filtering is performed to select a set of
genes for multiple tes…
Comment: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =
by
SofieK
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Thank you, I will try this and see.
Comment: DiffBind - question on the use of filtered or unfiltered input data
by
deltaexploitss
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Data input is the adding of data into a computer. This can take place through an input device such as a keyboard. A user inputs data, which…
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