Bioconductor Factdesign

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factDesign factDesign

updated 14.9 years ago by rgentleman ★ 5.5k • written 14.9 years ago by Alberto Goldoni ▴ 420

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Microarray genefilter affy factDesign Microarray genefilter affy factDesign

updated 14.9 years ago by Denise Scholtens ▴ 70 • written 14.9 years ago by De-Jian ZHAO ▴ 240

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multtest limma factDesign multtest limma factDesign

updated 20.1 years ago by Kasper Daniel Hansen ▴ 630 • written 20.1 years ago by Jordi Altirriba Gutiérrez ▴ 350

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affy limma siggenes factDesign maanova affy limma siggenes factDesign maanova

updated 15.0 years ago by Paolo Innocenti ▴ 320 • written 15.0 years ago by Gordon Smyth 50k

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affy limma siggenes factDesign maanova affy limma siggenes factDesign maanova

updated 14.9 years ago by James W. MacDonald 65k • written 14.9 years ago by Paolo Innocenti ▴ 320

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Survival cdf multtest affy factDesign biomaRt Survival cdf multtest affy factDesign

15.9 years ago Glazko, Galina ▴ 350

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factDesign factDesign

updated 19.8 years ago by Jeff Lande ▴ 110 • written 19.8 years ago by Denise Scholtens ▴ 70

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multtest limma factDesign multtest limma factDesign

updated 20.1 years ago by Jordi Altirriba Gutiérrez ▴ 350 • written 20.1 years ago by Denise Scholtens ▴ 40

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factDesign factDesign

updated 20.0 years ago by Denise Scholtens ▴ 40 • written 20.0 years ago by Claire Wilson ▴ 280

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factDesign factDesign

updated 20.0 years ago by Denise Scholtens ▴ 40 • written 20.0 years ago by Claire Wilson ▴ 280

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factDesign factDesign

updated 14.9 years ago by Richard Pearson ▴ 160 • written 14.9 years ago by Alberto Goldoni ▴ 420

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affy limma siggenes factDesign maanova affy limma siggenes factDesign maanova

15.0 years ago Paolo Innocenti ▴ 320

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Microarray multtest gcrma factDesign PROcess Microarray multtest gcrma factDesign PROcess

19.8 years ago Jeff Lande ▴ 110

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factDesign factDesign

14.9 years ago Alberto Goldoni ▴ 420

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limma factDesign limma factDesign

20.1 years ago Jordi Altirriba Gutiérrez ▴ 350

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Microarray Cancer multtest affy limma siggenes factDesign Microarray Cancer multtest

20.0 years ago James W. MacDonald 65k

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GO limma factDesign GO limma factDesign

20.1 years ago Gordon Smyth 50k

17 results • Page 1 of 1

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Comment: Deseq2 and Normalization of RNA sequencing data by kcarey • 0

Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …

Answer: NEED FOR NESSASORY HELP by Gordon Smyth 50k

Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…

Answer: Gene-by-sample covariates in limma by Gordon Smyth 50k

Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…

Answer: Why does GSEA on edgeR results for randomized samples give highly significant p- by Gordon Smyth 50k

You have discovered something that I have pointed out many times on this forum. fgsea does not implement the classic GSEA method published …

Comment: Once again a "Model matrix not full rank" by James W. MacDonald 65k

In that case both time and treatment are identical things, so choose one and go with it.

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Bioconductor 3.19 is Released!

A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

Answer: DEseq2 coefficient

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