Bioconductor FlowAI

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flowAI

4 months ago • updated 3 months ago Olena • 0

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flowAI

written 3.1 years ago by msoares • 0

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flowAI

10 months ago Simoluc • 0

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FlowAI FlowJo

3.0 years ago akaw3 • 0

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software error flow cytometry ggcyto flowAI

updated 4.0 years ago by Kevin Blighe ★ 3.9k • written 4.0 years ago by Robert Baer ▴ 70

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flowAI software error

4.2 years ago christopher.hall • 0

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flowAI flow_auto_qc QC flow cytometry

updated 4.6 years ago by gianni • 0 • written 4.6 years ago by vinko.tosevski • 0

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flowAI

5.8 years ago crostomily • 0

8 results • Page 1 of 1

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Comment: gds in GEOmetadb 2023-06-26 version is empty by Frederico Moraes Ferreira ▴ 100

Try axel -n 20 https://gbnci.cancer.gov/geo/GEOmetadb.sqlite.gz

Comment: Most enriched pathway is not expressed when modifying universe parameter by James W. MacDonald 66k

The default for `enrichGO` is to subset to those with a p-value<0.05. You don't adjust that default argument, so you shouldn't have any GO …

Answer: In a 3 group DEG analysis with three batches, can I use 1 group in all three bat by Michael Love 42k

You can compare A and C thanks to the sharing of samples from B across 1, 2 and 3.

Comment: Most enriched pathway is not expressed when modifying universe parameter by adripel • 0

In the enrichGO results we have significant and non-significant enriched terms that are displayed. So why would an enriched term (significa…

Answer: Design formula, numeric contrast, and lfcshrink in deseq2 by Michael Love 42k

For questions about how to construct the correct contrasts correspond to particular hypotheses, I recommend consulting with a local statist…

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Comment: Most enriched pathway is not expressed when modifying universe parameter

Time-course, comparison of two groups

Answer: Behaviour of featureCounts when quantifying multi-mapping reads

Answer: GESA with certain gene list returns no result with human genom, but many result

Answer: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`

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