Showing : flowmerge • reset
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choosing plot axes in flowmerge
flowmerge
8.8 years ago adlerj • 0
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extracting data from flowmerge obj
flowmerge
8.8 years ago adlerj • 0
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FlowMerge: Get Count, Frequencies, MFI from resulting cluster
flowmerge MFI
updated 9.9 years ago by ▴ 240 • written 10.2 years ago by • 0
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Problem with flowMerge
flowMerge flowMerge
12.2 years ago oscar Jottrand ▴ 10
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GPU Computing with Flow Cytometry
flowMerge flowMerge
updated 13.2 years ago by ▴ 10 • written 13.2 years ago by ▴ 40
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Update to FlowMerge
Cancer flowMerge Cancer flowMerge
14.7 years ago Greg Finak ▴ 240
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Update to flowMerge
Cancer flowMerge Cancer flowMerge
updated 14.7 years ago by ▴ 150 • written 14.7 years ago by ▴ 240
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Installing problems of Flow Cytometry on Ubuntu
Cancer flowMerge iFlow Cancer flowMerge iFlow
15.9 years ago Josef Spidlen ▴ 140
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Installing problems of Flow Cytometry on Ubuntu Karmic
flowMerge iFlow flowMerge iFlow
updated 15.9 years ago by 6.7k • written 15.9 years ago by ▴ 20
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Answer: When to use edgeR or limma by Gordon Smyth 53k
The short answer is that we generally prefer edgeR for applications with lots of small counts and limma for complex designs with random eff…
Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry by Gordon Smyth 53k
I updated the above answer today.
Answer: When to use edgeR or limma by James W. MacDonald 68k
I would use edgeR's quasi-likelihood model for any analysis with a smaller number of observations (like 3 vs 3 or similar), but if you have…
Answer: limpa-blank normalization and Spectronaut's PTM stoichiometry by Gordon Smyth 53k
The short answer is that limpa reads standard feature-level intensities from Spectronaut or other quantifications tools. limpa is designed …
Comment: Question about the filterByExpr function inputs in edgeR by mohammedtoufiq91 ▴ 10
@gordonsmyth Noted, thank you very much.
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A: deseq2 - paired samples in 2 sequencing types with very different library sizes
Comment: Question about the filterByExpr function inputs in edgeR
Answer: Question about the filterByExpr function inputs in edgeR
Answer: Question about the filterByExpr function inputs in edgeR
A: DESeq2: What is the unit of DESeq2 normalized read count (VST)? Is it tag per mi
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