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flowmerge
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choosing plot axes in flowmerge
flowmerge
7.1 years ago
adlerj
• 0
0
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1
reply
792
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extracting data from flowmerge obj
flowmerge
7.1 years ago
adlerj
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1.1k
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FlowMerge: Get Count, Frequencies, MFI from resulting cluster
flowmerge
MFI
updated 8.2 years ago by
Greg Finak
▴ 240 • written 8.4 years ago by
veronikag
• 0
0
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0
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801
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Problem with flowMerge
flowMerge
flowMerge
10.5 years ago
oscar Jottrand
▴ 10
0
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4
replies
2.0k
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GPU Computing with Flow Cytometry
flowMerge
flowMerge
updated 11.4 years ago by
Kevin Schiesser
▴ 10 • written 11.4 years ago by
Kevin Schiesser
▴ 40
0
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0
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718
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Update to FlowMerge
Cancer
flowMerge
Cancer
flowMerge
12.9 years ago
Greg Finak
▴ 240
0
votes
1
reply
904
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Update to flowMerge
Cancer
flowMerge
Cancer
flowMerge
updated 12.9 years ago by
Greg Finak
▴ 150 • written 12.9 years ago by
Greg Finak
▴ 240
0
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0
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1.0k
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Installing problems of Flow Cytometry on Ubuntu
Cancer
flowMerge
iFlow
Cancer
flowMerge
iFlow
14.2 years ago
Josef Spidlen
▴ 140
0
votes
2
replies
1.1k
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Installing problems of Flow Cytometry on Ubuntu Karmic
flowMerge
iFlow
flowMerge
iFlow
updated 14.2 years ago by
Vincent J. Carey, Jr.
6.7k • written 14.2 years ago by
Philipp Meng
▴ 20
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Comment: Reproducibility issue with scran together with lapply and BiocParallel
by
ATpoint
★ 4.0k
Thanks Aaron for the response. RNGseed (for me) has no effect. I actually stumbled over this in one of my analysis where I have a constant …
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! 1)"Your contrast is comparing LGR5 to Homeostasis." means (Lgr5)/(Homeostasis). Is it right? Then, I think if…
Answer: Reproducibility issue with scran together with lapply and BiocParallel
by
Aaron Lun
★ 28k
IIRC **BiocParallel** switches to a different RNG when inside its own functions like `bplapply` - specifically L'Ecuyer-CMRG, as opposed to…
Comment: DESeq2 output used for PCA plot on R studio
by
swbarnes2
★ 1.3k
This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…
Comment: DESeq2 output used for PCA plot on R studio
by
Aaliya
• 0
I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…
Votes
C: null model and DEXSeqDataSet object in DEXSEQ
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Answer: Interpret plot from DiffBind
Answer: How to retrieve gene ontology GO class from gene list?
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