Biostar Gene significance

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WGCNA co-expression analysis gene significance module membership module-trait relationship

updated 23 days ago by annamariabugaj ▴ 10 • written 2.8 years ago by rodrigo.duarte88 ▴ 30

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wgcna module membership gene significance

updated 3.3 years ago by Peter Langfelder ★ 2.7k • written 3.3 years ago by neber • 0

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Comment: How to get DESeq2 results for a list of genes by ATpoint ★ 1.3k

That's a problem related to your lack of R basics, neither DESeq2 or Bioconductor software/technical problem. Please learn R basics first. …

Comment: How to get DESeq2 results for a list of genes by Lucía ▴ 10

Hi, thank you! Unfortunately that doesn't work. The first option gives me this error: ``` # Extracting for list my_genes <- read.delim("di…

Comment: Error by ATpoint ★ 1.3k

https://github.com/conda-forge/rpy2-feedstock/issues/1

Comment: Error: BiocParallel errors by lxl13260684135 • 0

I came across the same problem, have you solved it?

Answer: How to get DESeq2 results for a list of genes by ATpoint ★ 1.3k

Standard rules apply for filtering in R. If the genes are the rownames of the results object `res` then: res[my_ges,] or if the colu…

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How to get DESeq2 results for a list of genes

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