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genesis
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GENESIS: error in crossprod
GENESIS
11 weeks ago
Stephanie M. Gogarten
▴ 870
0
votes
2
replies
420
views
GENESIS: Can not use GdsGenotypeReader to read a gds file
GENESIS
GWASTools
GDSfile
updated 5 months ago by
Stephanie M. Gogarten
▴ 870 • written 5 months ago by
Mindy wang
• 0
0
votes
2
replies
402
views
SKAT-O method using GENESIS, question about range iterator using SeqVarWindowIterator
GENESIS
SeqVarTools
updated 6 months ago by
Stephanie M. Gogarten
▴ 870 • written 6 months ago by
pjuge
• 0
1
vote
1
reply
452
views
HOW to FIX - PCAir excludes all my SNPs because there is no chromosome information
GENESIS
autosome-only=FALSE?
PCAir
updated 6 months ago by
James W. MacDonald
65k • written 6 months ago by
gabry.scata
• 0
0
votes
0
replies
278
views
How many ancestries to send in admixMap() when doing a two-way analysis?
GENESIS
admixMap
6 months ago
mailtoshivam13
• 0
2
votes
5
replies
776
views
assocTestSingle output with GxE
GENESIS
updated 10 months ago by
Stephanie M. Gogarten
▴ 870 • written 10 months ago by
SuperDad
• 0
6 results • Page
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Comment: Couldn't connect to server while using "pathways"
by
Michael Love
41k
You've put the tag "DESeq2" which results in an email to the maintainer, me, that I should respond to a post on the support site. Can you …
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Vincent J. Carey, Jr.
6.7k
btw that was run on M1 mac
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Vincent J. Carey, Jr.
6.7k
the test is not portable > aa <- aa_mutmat(acc = "MIYS930101", aaindex = "aaindex2") > str(aa) num [1:20, 1:20] 0.34 -0.0…
Comment: Method to find pathways different between 2 groups
by
Chris
• 0
Sorry for not clear. I just try to find papers use this method for learning purpose. Which gives more context and detail examples, so I may…
Comment: Improving the design matrices vignette in RNAseq123
by
Lluís Revilla Sancho
▴ 730
Cool. Thanks for looking into it.
Votes
Answer: Method to find pathways different between 2 groups
Comment: Trying to use enrichGO
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Handling multiple differential expression comparisons
Answer: fgsea significant result
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