Bioconductor Germline

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PureCN germline SNP

updated 6.3 years ago by kakbrus • 0 • written 6.5 years ago by twtoal ▴ 10

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PureCN indel somatic germline

updated 7.3 years ago by markus.riester ▴ 130 • written 7.3 years ago by pathkim • 0

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PureCN Germline Normal CNV

updated 6.0 years ago by markus.riester ▴ 130 • written 6.0 years ago by twtoal ▴ 10

3 results • Page 1 of 1

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Comment: Only positive enrichment score in GSEA by JulietteWatson • 0

@[geometry dash deadlocked](https://geometrydashdeadlocked.com): You code very quickly and accurately, can you give me your secret?

Answer: Trying to convert ATACseq annotations of non-model species into human orthologs, by James W. MacDonald 67k

I would use the mapper I note above, and build your own `OrgDb`, then do the GO analysis directly. ``` > library(AnnotationForge) > op…

Comment: Trying to convert ATACseq annotations of non-model species into human orthologs, by James W. MacDonald 67k

There's already an `OrgDb` for this species on the AnnotationHub that hypothetically would be ideal, but there are almost no GO mappings, s…

Answer: Trying to convert ATACseq annotations of non-model species into human orthologs, by James W. MacDonald 67k

It's probably not going to work that well using that species, but you can give it a shot. Note that you don't appear to have any good IDs. …

Comment: Trying to convert ATACseq annotations of non-model species into human orthologs, by Guido Hooiveld ★ 4.1k

Not an answer to your question, but it seems the content of the column `Entrez ID` are actually no *entrez ids* but rather *aliases*... Ent…

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