Showing : indel • reset
2
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3
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556
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PureCN can classify indel variants as germline vs. somatic ?
PureCN indel somatic germline
updated 4.3 years ago by ▴ 110 • written 4.3 years ago by • 0
1
vote
2
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592
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Locating enhancers that are mutated
snv granges genomicranges variantannotation indel
updated 5.1 years ago by 11k • written 5.1 years ago by • 0
0
votes
1
reply
477
views
Mapping sequence features to alignments
pairwisealignment indel
updated 5.2 years ago by 15k • written 5.2 years ago by ▴ 10
2
votes
4
replies
993
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customProDB: error aberrant fasta from indels
indel customprodb fasta variantannotation
updated 6.2 years ago by ▴ 50 • written 6.2 years ago by • 0
1
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0
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839
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Genome editing analysis with Illumina sequencing
indel sequencing alignment
6.4 years ago Merienne Nicolas ▴ 120
2
votes
2
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754
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Failed assertion in subjunc aligner for large indels
rnaseq subjunc indel
updated 6.8 years ago by ★ 3.3k • written 6.9 years ago by ▴ 90
6
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11
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1.7k
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Comparing read sequence back to reference sequence
bam indel genomicalignments biostrings
updated 6.8 years ago by ▴ 180 • written 6.8 years ago by ▴ 40
7 results • Page 1 of 1
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Comment: Diffbind dba.plotProfile attempt to select less than one element in OneIndex by bhanratt • 0
``` > DBA 10 Samples, 31953 sites in matrix: ID Tissue Factor Condition Replicate Reads FRiP 1 58 1 H3K4me3 AD …
Answer: Warning messages on Apple M1 BigSur by Vincent J. Carey, Jr. 6.5k
We are not producing M1 binaries at this time. If you use the intel version of R under Rosetta 2 you can use the intel mac binaries.
Comment: Issue::DesignPrimers DECIPHER by slwmartin • 0
Hey, I'm having this issue too. I've tried reinstalling using Conda a few times without luck. Did you reinstall with Conda or from the tar …
Comment: Log fold change interpretation of time series with Wald test by jd348 • 0
So would you recommend still using Log2fold change as a measurement for effect size?
Answer: Error in `*tmp*`$samples : $ operator is invalid for atomic vectors by James W. MacDonald 58k
I believe you want ``` > x <- as.matrix(read.delim("E:/bioinformatic/RNAseq/GSE168008_raw_count.txt", sep ="" ,row.names = 1)) > sampl…
Votes
Comment: Use of coef() as a measure of effect size in a multiple regression using DESeq2
Answer: Log fold change interpretation of time series with Wald test
A: gviz: name of tracks disappeas
Answer: Degust: what normalization method does it use
Answer: ylim and xlim in Enhanced Volcano
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Teacher to Vincent J. Carey, Jr. 6.5k
Scholar to Rory Stark ★ 4.1k
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Scholar to Yang Liao ▴ 260
Scholar to James W. MacDonald 58k
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