Bioconductor Ggtools

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1.1k

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GGtools GGtools

updated 10.7 years ago by Vincent J. Carey, Jr. 6.7k • written 10.7 years ago by Fabrice Tourre ▴ 970

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1.8k

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SNP Annotation probe SNPlocs GGtools SNP Annotation probe SNPlocs GGtools

updated 12.2 years ago by Vincent J. Carey, Jr. 6.7k • written 12.2 years ago by Guest User ★ 13k

votes

1.6k

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SNP convert GGtools snpMatrix SNP convert GGtools snpMatrix

updated 13.5 years ago by Vincent J. Carey, Jr. 6.7k • written 13.5 years ago by Mao Jianfeng ▴ 290

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1.0k

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SNP GGtools SNP GGtools

updated 13.7 years ago by Vincent J. Carey, Jr. 6.7k • written 13.7 years ago by Richard Pearson ▴ 160

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1.7k

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Infrastructure GUI Ruuid GGtools GGBase Infrastructure GUI Ruuid GGtools GGBase

updated 13.7 years ago by Vincent J. Carey, Jr. 6.7k • written 13.7 years ago by Neel Aluru ▴ 460

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1.8k

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GUI GGtools GGBase GUI GGtools GGBase

updated 13.8 years ago by Vincent J. Carey, Jr. 6.7k • written 13.8 years ago by Neel Aluru ▴ 460

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2.5k

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GGtools GGtools

updated 13.8 years ago by Martin Morgan 25k • written 13.8 years ago by Mao Jianfeng ▴ 290

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1.2k

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GGtools GGtools

updated 14.0 years ago by Vincent J. Carey, Jr. 6.7k • written 14.0 years ago by Mao Jianfeng ▴ 290

votes

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1.3k

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SNP HapMap GGtools SNP HapMap GGtools

updated 14.7 years ago by Vincent J. Carey, Jr. 6.7k • written 14.7 years ago by claire pujoll ▴ 30

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1.4k

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GGtools GGtools

updated 14.9 years ago by Vincent J. Carey, Jr. 6.7k • written 14.9 years ago by Paul Geeleher ★ 1.3k

votes

912

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SNP GGtools SNP GGtools

updated 16.3 years ago by Vincent J. Carey, Jr. 6.7k • written 16.3 years ago by Nathan Harmston ▴ 100

11 results • Page 1 of 1

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Comment: DESeq2 sizefactors counfounded with biological treatment by Anna • 0

Hi James, Apologies (re: posting in the wrong place). Thank you so much for your response, that was exactly the help I needed. Best, A…

Comment: ANOVA like approach of edgeR by Talip ▴ 10

I am comparing the expression patterns of different tissue cell lines (CellType) under five distinct media conditions (Status). Since the c…

Comment: Merge Replicates vs Mixed Model by gabriel.hoffman ▴ 160

It is almost always better to retain the full observed data, if the statistical software is able to model the repeated measures. This is a…

Comment: makeContrastsDream for Interaction by gabriel.hoffman ▴ 160

The simplest way to handle contrasts with an interaction term is to create a new variable. Lets consider a simpler case with variables `Se…

Answer: DESeq2 sizefactors counfounded with biological treatment by James W. MacDonald 67k

Your question is off-topic for this site, which is primarily intended to help people with technical issues with Bioconductor packages rathe…

Votes

Answer: ANOVA like approach of edgeR

Answer: biomaRt has encountered an unknown server error while using getLDS

Comment: txdb.mmusculus.ucsc.mm10.knowngene issue on X chromosome

Answer: Epic v2 Annotation CpG_maf source?

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Teacher to Gordon Smyth 52k

Popular Question to Hans-Ulrich Klein ▴ 330