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GenomicAlignments - extracting sequence signatures from bam file
bam file HIV cytosine
8.3 years ago achaillon • 0
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Job: Bioinformatician - The Ragon Institute of MGH, MIT and Harvard
bioinformatician job bioinformatics immunology HIV Job
9.1 years ago • updated 8.9 years ago Ragon Institute of MGH, MIT and Harvard • 0
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ComBat
Transcription Genetics Pathways Network Survival Cancer Breast Colon Kidney Leukemia HIV
13.3 years ago SSc Array Core ▴ 10
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Post Doctoral Openings at University of Pittsburgh
Bayesian HIV Bayesian HIV
13.3 years ago Porterfield, Toni ▴ 10
0
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Correlation analysis
Microbiome HIV Microbiome HIV
updated 14.3 years ago by 21k • written 14.3 years ago by ▴ 20
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1.6k
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eBayes error
HIV HIV
updated 15.0 years ago by 21k • written 15.0 years ago by ▴ 570
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Rtreemix (NEW package)
Cancer HIV Rtreemix Cancer HIV Rtreemix
17.7 years ago Jasmina Bogojeska ▴ 30
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postdoc position available at FHCRC
Cancer HIV Cancer HIV
18.0 years ago Harlan Robins ▴ 10
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2.3k
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Postdoctoral position for 'Statistical Methods in Bioinformatics'
Genetics HIV Genetics HIV
19.2 years ago Adrian Alexa ▴ 400
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4
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2.2k
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Using limma with contrast matrix ,replicate spots, donor effects
HIV limma HIV limma
updated 21.0 years ago by 53k • written 21.0 years ago by ▴ 120
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2
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Re: NA's
HIV HIV
23.9 years ago rgentleman ★ 5.5k
11 results • Page 1 of 1
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Comment: Error message that there is no package called Biobase by DamionLedner99 • 0
thanks for sharing!!! https://cran.r-project.org/
Comment: msmsTests, inconsistent sign between lFC.Av and LogFC by Ben • 0
Continued here due to posting difficulties: Extract from the results table: ``` Inhibitor Vehicle lFC.Av LogFC ... F1 0.0 27…
Answer: DESeq2 for 16S rRNA Analysis by James W. MacDonald 68k
The Wald test is only meant for comparison of two groups at a time, so it depends on what you mean by 'analyze across multiple groups at a …
Comment: MetaDE.pvalue: Error in xj[i]: invalid subscript type 'list' by varying.mastodon.isyn • 0
Oh, that error! I remember wrestling with that one for hours when I was first learning Python. Turns out I was trying to use a list itself …
Comment: Confirm that OpenStats will not be archived (pryr dependency) by Marina • 0
Thank you!
Votes
Comment: Are transformed values from rlog /vst log2 normalized counts?
Answer: Are transformed values from rlog /vst log2 normalized counts?
A: DESeq2 normalization vs VST vs rlog
Answer: How to directly decet the outlier samples (libraries) in EdgeR pipeline
Answer: Confused about the CPM and TMM normalization in edgeR
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