Bioconductor Idiogram

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idiogram idiogram

12.6 years ago Paul Shannon ★ 1.1k

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idiogram GenomeGraphs idiogram GenomeGraphs

updated 13.5 years ago by Kasper Daniel Hansen 6.5k • written 13.5 years ago by Ramzi TEMANNI ▴ 160

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Annotation Cancer geneplotter idiogram rtracklayer Annotation Cancer geneplotter idiogram

14.0 years ago Martin Morgan 25k

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Organism idiogram Organism idiogram

14.6 years ago Dykema, Karl ▴ 90

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1.5k

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idiogram GenomeGraphs idiogram GenomeGraphs

updated 15.0 years ago by Oosting, J. PATH ▴ 550 • written 15.0 years ago by Michael Gormley ▴ 60

5 results • Page 1 of 1

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Answer: multiple filters in biomaRt by RuBBiT0 ▴ 10

First, yes, one gene could be related to several GO ID, and the result is based on the annotation package you use. Second, could you pro…

Comment: Diffbind "No genome detected" by kyliecode • 0

Hi Dr. Stark, Thanks very much for your reply! The bam files were output from nf-core/chipseq pipeline and for some reason, they do not ha…

Answer: Discrepancy between DESeq2 files produced in Galaxy and R(RStudio) by Michael Love 40k

I guess that Galaxy may be using some kind of LFC shrinkage, but without seeing their code I wouldn't know for sure. Shrinkage generally…

Comment: TCGAbiolinks cannot find bcr_patient_barcode by Habil Zare ▴ 170

I checked your example with the devel version 2.29.6 on Bioc and it worked fine. Thanks for the fix!

Answer: error in ChAMP loading file by jenniferbrowngates • 0

I got a lot of information from this website about different topics which is beneficial for me too so I thank this site and also suggest a …

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Answer: Using PEER to identify hidden confounders in RNA-seq data (not working)

Comment: Error: biomaRt has encountered an unexpected server error.

Comment: Interpret plot from DiffBind

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Scholar to Tiago C. Silva ▴ 270