Bioconductor Iterators

Showing : iterators • reset

1

vote

8

replies

3.2k

views

r iterators performance

updated 9.4 years ago by phil.chapman ▴ 150 • written 9.4 years ago by chrisclarkson100 ▴ 50

6

votes

7

replies

2.4k

views

r findoverlaps iterators

updated 9.9 years ago by Hervé Pagès 16k • written 9.9 years ago by Jurat Shahidin ▴ 80

1

vote

2

replies

1.9k

views

foreach iterators

9.9 years ago ben.ward ▴ 30

0

votes

4

replies

1.9k

views

dnastringset parallel iterators

10.0 years ago ben.ward ▴ 30

4 results • Page 1 of 1

Recent ...

Replies

Comment: Question about DESeq2 Design for Paired Treatment Study by ATpoint ★ 5.0k

It's a paired analysis so you don't need any patient-specific covariates such as age and sex. What you call batch effect might just be the …

Comment: problem reading bam files into nucleR by efoss ▴ 10

I thought I might be able to track down a problematic line in the bam file by repeatedly splitting the bam file in and then running the co…

Answer: two questions about limma by Gordon Smyth 53k

Answered here: https://support.bioconductor.org/p/16318/

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0

Thank you very much! will take that into consideration

Comment: Large logFC but somewhat high FDR by JKim • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.

Votes

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

Awards • All

Popular Question to jared.andrews07 ▴ 30

Popular Question to James W. MacDonald 68k