Bioconductor Dnastringset

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949

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dnastringset dnastringsetlist seqnames

6.1 years ago s.ghignone ▴ 10

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4.0k

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dnastringset list stringset

updated 7.5 years ago by Martin Morgan 25k • written 7.5 years ago by vinod.acear ▴ 50

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4.9k

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subseq Xvector dnastringset

updated 7.6 years ago by Hervé Pagès 16k • written 7.6 years ago by Sophie • 0

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1.0k

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dnastringset aastringset

7.8 years ago XIA.PAN ▴ 20

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6.2k

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DNAstringset

updated 7.8 years ago by Hervé Pagès 16k • written 7.8 years ago by XIA.PAN ▴ 20

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5.7k

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dnastringset getseq

updated 8.4 years ago by Hervé Pagès 16k • written 8.4 years ago by TimothéeFlutre ▴ 80

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2.0k

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pwmenrich dnastringset

updated 8.7 years ago by Robert Stojnic ▴ 50 • written 8.7 years ago by sekawaiwai2006 ▴ 20

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1.6k

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dnastringset parallel iterators

9.0 years ago ben.ward ▴ 30

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1.3k

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DNAStringSet sample

updated 9.1 years ago by Hervé Pagès 16k • written 9.1 years ago by vinod.acear ▴ 50

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19k

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dnastringset

updated 9.1 years ago by Martin Morgan 25k • written 9.1 years ago by komal.rathi ▴ 120

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2.0k

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vcf testthat dnastringset

9.1 years ago TimothéeFlutre ▴ 80

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4.7k

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readVcf DNAStringSet DNAStringSetList variantannotation readvcf

9.6 years ago dan.gatti • 0

12 results • Page 1 of 1

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Comment: Running multiple KNN queries in parallel by SamGG ▴ 360

Thank you for your detailed answer, I appreciate it and your work.

Answer: Running multiple KNN queries in parallel by Aaron Lun ★ 28k

That is correct - you can't pass the prebuilt objects to different processes. Maybe `MulticoreParam()` might work on POSIX systems but I'm …

Answer: RSubread output significantly different from bash Subread output by Gordon Smyth 52k

The difference (as ATpoint has correctly pointed out) is that Rsubread::featureCounts counts multi-mapping reads by default whereas the com…

Answer: Deseq2 Error in solve.default(qr.R(qrx)) : 'a' (1 x 0) must be square by Michael Love 43k

I would check the rank of your model matrix, and perhaps meet with a local statistician who can help you create an appropriate design matri…

Comment: sva: get a sv for RIN scores by gabriel.hoffman ▴ 170

Agreed. I'll add that with small sample size, a covariate can explain some fraction of expression variation even under the null.

Votes

Answer: Running multiple KNN queries in parallel

Answer: RSubread output significantly different from bash Subread output

Answer: How to annotate a limma Elist raw class object with an annotation file

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