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lea
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606
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LEA get Q-matrix from best snmf() run
LEA
23 months ago
janis
• 0
0
votes
0
replies
570
views
LEA package (3.6.0): tracy-widom test problems
tracy-widom
PCA
LEA
2.1 years ago
Bruna
• 0
0
votes
0
replies
556
views
Zeros in p values in snmf analysis from LEA packge
LEA
snmf
2.3 years ago
Hanan
• 0
0
votes
3
replies
2.3k
views
internal error in trio library when trying to use lfmm() in LEA package
lfmm
LEA
updated 5 weeks ago by
m.charters
• 0 • written 3.0 years ago by
valentinarov
• 0
0
votes
1
reply
1.7k
views
R aborts when attempting to use snmf function in LEA package
snmf
lea
updated 6.8 years ago by
olivier.francois
• 0 • written 6.8 years ago by
renee.catullo
• 0
0
votes
2
replies
2.3k
views
Tutorial:
LEA won't run lfmm sequentially and independently on individual environmental variables when d set to 0
LEA
lfmm
Tutorial
updated 7.0 years ago by
eric.frichot
• 0 • written 7.0 years ago by
afreedman405
• 0
6 results • Page
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Comment: Deseq2 and Normalization of RNA sequencing data
by
kcarey
• 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP
by
Gordon Smyth
50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Answer: Gene-by-sample covariates in limma
by
Gordon Smyth
50k
Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Gordon Smyth
50k
You have discovered something that I have pointed out many times on this forum. fgsea does not implement the classic GSEA method published …
Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
In that case both time and treatment are identical things, so choose one and go with it.
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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