Showing : lpe • reset
0
votes
18
replies
2.4k
views
LPE error caused by gcRMA [Error in var.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]
Cancer gcrma LPE affylmGUI Cancer gcrma LPE affylmGUI
updated 15.5 years ago by ▴ 70 • written 15.5 years ago by ★ 13k
0
votes
7
replies
1.7k
views
Statistical comparison of low replicate affy data
affy gcrma siggenes LPE affy gcrma siggenes LPE
20.2 years ago Matthew Hannah ▴ 940
0
votes
3
replies
1.6k
views
Bioconductor 2.3 is released
aCGH Sequencing miRNA Microarray Visualization Bayesian Classification Survival Yeast LPE
15.5 years ago Patrick Aboyoun ★ 1.6k
0
votes
3
replies
2.6k
views
Inherits(x,"data.frame") error in SamR
Microarray Normalization Preprocessing Bayesian Clustering TimeCourse Cancer affy vsn LPE
18.2 years ago McGee, Monnie ▴ 300
0
votes
2
replies
1.1k
views
LPE error caused by gcRMA [Error in var.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]
Cancer gcrma LPE Cancer gcrma LPE
updated 15.5 years ago by ★ 1.6k • written 15.5 years ago by ▴ 70
0
votes
1
reply
983
views
FDR adjustment in LPE
LPE LPE
updated 19.0 years ago by ▴ 70 • written 19.0 years ago by ▴ 40
0
votes
1
reply
948
views
local pooled error
LPE LPE
updated 19.1 years ago by ▴ 210 • written 19.1 years ago by ★ 1.3k
0
votes
1
reply
1.2k
views
problem with LPE
LPE LPE
updated 20.2 years ago by ▴ 30 • written 20.2 years ago by ▴ 720
0
votes
1
reply
1.0k
views
LPE errors
LPE LPE
updated 19.4 years ago by ▴ 70 • written 19.4 years ago by ▴ 40
0
votes
1
reply
964
views
Limma or something else ? plus Normalization question
limma LPE PROcess limma LPE PROcess
updated 20.6 years ago by 50k • written 20.6 years ago by ▴ 720
0
votes
1
reply
1.1k
views
Help with LPE error message
LPE LPE
updated 19.2 years ago by ▴ 70 • written 19.2 years ago by ▴ 140
0
votes
0
replies
907
views
PLPE error
Microarray affy LPE PLPE Microarray affy LPE PLPE
15.3 years ago Dennis.Burian@faa.gov ▴ 90
0
votes
0
replies
906
views
question about RMA and filtering
affy LPE affy LPE
20.8 years ago Phguardiol@aol.com ▴ 720
0
votes
0
replies
949
views
Limma or something else ? plus Normalization question
Normalization affy limma LPE PROcess Normalization affy limma LPE PROcess
20.6 years ago Gordon Smyth 50k
0
votes
0
replies
815
views
LPE
cdf affy LPE ASSIGN cdf affy LPE ASSIGN
19.2 years ago Harry Hurd ▴ 60
0
votes
0
replies
846
views
LPE
cdf affy LPE ASSIGN cdf affy LPE ASSIGN
19.2 years ago Jain, Nitin ▴ 70
0
votes
0
replies
830
views
pools and tech rep
limma LPE limma LPE
18.9 years ago Ariel Chernomoretz ▴ 380
0
votes
0
replies
861
views
LPE method based on RMA vs. MAS5
Preprocessing LPE Preprocessing LPE
18.7 years ago Jain, Nitin ▴ 70
0
votes
0
replies
878
views
incoherence with LPE
LPE LPE
18.7 years ago Jain, Nitin ▴ 70
0
votes
0
replies
852
views
LPE question
LPE LPE
18.2 years ago Jain, Nitin ▴ 70
0
votes
0
replies
769
views
A friendly mention of LPE package
LPE LPE
16.2 years ago pingzhao Hu ▴ 210
0
votes
0
replies
1.0k
views
LPE error and warnings
LPE LPE
19.5 years ago Stephanie Mewborn ▴ 40
22 results • Page 1 of 1
Recent ...
Replies
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k
Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …
Comment: Help with running egsea() by James W. MacDonald 65k
Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…
Comment: Help with running egsea() by Chris • 0
Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…
Comment: Help with running egsea() by James W. MacDonald 65k
I don't understand the last question, but do look at the msigdb.gsets argument to `buildIdx` in the help page for that function.
Answer: Help with running egsea() by James W. MacDonald 65k
There are no arguments to `egsea.base`, as it is meant only as a helper function to return the different methods. In addition, if you are u…
Votes
Comment: Help with running egsea()
Answer: Trim/Filter out-of-bounds GRanges
Comment: Help with running egsea()
Answer: How to save the DEXSeq results
Answer: How to save the DEXSeq results
Awards • All
Scholar to Michael Love 41k
Popular Question to Malcolm Cook ★ 1.6k
Teacher to Gordon Smyth 50k
Popular Question to priyanka.m • 0
Popular Question to Vincent J. Carey, Jr. 6.7k
Locations • All
India, 2 minutes ago
United States, 2 minutes ago
Sweden, 8 minutes ago
United States, 12 minutes ago
France, 17 minutes ago
Traffic: 723 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6