Bioconductor Mean

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votes

3.2k

views

R ROC mean plot multiple roc curves

updated 6.1 years ago by chris86 ▴ 420 • written 6.1 years ago by sap940 • 0

votes

1.4k

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limma mean sd

updated 6.6 years ago by Aaron Lun ★ 28k • written 6.6 years ago by mheydarpour ▴ 10

votes

895

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Mean R

updated 7.0 years ago by Gordon Smyth 51k • written 7.0 years ago by kritikamish99 ▴ 10

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replies

2.0k

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deseq2 mean

updated 7.6 years ago by Michael Love 42k • written 7.6 years ago by asd • 0

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1.8k

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granges Rle coverage View mean

updated 8.3 years ago by Michael Lawrence ★ 11k • written 8.3 years ago by Christian Ruckert ▴ 170

vote

942

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mean standard deviation

updated 9.1 years ago by James W. MacDonald 67k • written 9.1 years ago by vinod.acear ▴ 50

6 results • Page 1 of 1

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Replies

Answer: Differential Expression Analysis with unbalanced batches without replication bet by Gordon Smyth 51k

> Is there an alternative model or approach in tools like edgeR, limma-voom, or DESeq2 or any other that can handle confounded batch effect…

Comment: BiomaRt Possible Ensembl SSL connectivity problems detected. by Adam • 0

I just found this workaround: httr::set_config(config(ssl_verifypeer = FALSE, ssl_verifyhost = FALSE)) at [this Stack Overflow link][…

Comment: Problem at champ.load by icecreamlover • 0

Hello! Were you able to figure this out? I am running into the same error!

Comment: ChAMP - obtaining beta values using EPICv2 annotation by icecreamlover • 0

Hello, Were you able to fix the error? I used the same document and I am running into the same error. I am curious if you have any feedba…

Comment: BiomaRt Possible Ensembl SSL connectivity problems detected. by Adam • 0

Can this please be revisited and corrected ASAP? I'm encountering the same issue, using a slightly more modern version of R (4.1.0). It s…

Votes

A: Up/Down Regulated GeneList from edgeR and R

A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis

Answer: Combining RNAseq and microarray data using edgeR/limma-voom

Answer: How do I merge a list of GRanges?

Awards • All

Teacher to Gordon Smyth 51k

Popular Question to Guido Hooiveld ★ 4.1k