Bioconductor Mean

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3.6k

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R ROC mean plot multiple roc curves

updated 7.2 years ago by chris86 ▴ 420 • written 7.2 years ago by sap940 • 0

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1.6k

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limma mean sd

updated 7.7 years ago by Aaron Lun ★ 29k • written 7.7 years ago by mheydarpour ▴ 10

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1.1k

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Mean R

updated 8.1 years ago by Gordon Smyth 53k • written 8.1 years ago by kritikamish99 ▴ 10

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replies

2.3k

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deseq2 mean

updated 8.7 years ago by Michael Love 43k • written 8.7 years ago by asd • 0

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2.1k

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granges Rle coverage View mean

updated 9.4 years ago by Michael Lawrence ★ 11k • written 9.4 years ago by Christian Ruckert ▴ 170

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1.1k

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mean standard deviation

updated 10.1 years ago by James W. MacDonald 68k • written 10.1 years ago by vinod.acear ▴ 50

6 results • Page 1 of 1

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Answer: problem reading bam files into nucleR by James W. MacDonald 68k

The first step is to update to the current versions of R/Bioconductor and try again. It's possible that you have run into a bug that's alre…

Answer: Question about DESeq2 Design for Paired Treatment Study by ATpoint ★ 5.0k

It's a paired analysis so you don't need any patient-specific covariates such as age and sex. What you call batch effect might just be the …

Comment: problem reading bam files into nucleR by efoss ▴ 10

I thought I might be able to track down a problematic line in the bam file by repeatedly splitting the bam file in and then running the co…

Answer: two questions about limma by Gordon Smyth 53k

Answered here: https://support.bioconductor.org/p/16318/

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0

Thank you very much! will take that into consideration

Votes

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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