Showing : moderated t-test • reset
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Differential analysis between 2 groups (n=1) vs (n=3) moderated t-test
moderated t-test limma differential gene expression small sample size
updated 6.4 years ago by 52k • written 6.4 years ago by • 0
3
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5
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Limma validity for only hundreds of genes/metabolites
limma metabolite data moderated t-test
updated 7.4 years ago by ★ 28k • written 7.4 years ago by • 0
5
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4
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Multiple Testing Correction
limma rnaseq moderated t-test
9.4 years ago ea1402 ▴ 20
3
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4.6k
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Moderated t-test in Anova
anova moderated t-test
updated 9.5 years ago by 52k • written 9.5 years ago by • 0
4 results • Page 1 of 1
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Comment: What type of counts data to import for performing Isoform analysis in edgeR by mohammedtoufiq91 ▴ 10
@gordonsmyth I will re-run Salmon with the --numGibbsSamples=50 option. Thank you.
Comment: Differential Expression Genes as Independent Variables by Gordon Smyth 52k
Such an analysis cannot be done in limma. Sorry, I cannot tell you how to do it or even whether it is possible.
Comment: Differential Expression Genes as Independent Variables by abadgerw • 0
The data that is repeated is a quantitative metric of post-mortem pathology across multiple sections. Not all patients have the same number…
Answer: Crossover design with limma by Gordon Smyth 52k
Your experiment is somewhat more elaborate than a classical crossover design because of the period-specific baseline controls. The analyses…
Answer: Differential Expression Genes as Independent Variables by Gordon Smyth 52k
Sorry, your question doesn't make sense to me. There are tens of thousands of genes and you can't run a mixed model analysis with one depen…
Votes
Comment: What type of counts data to import for performing Isoform analysis in edgeR
Answer: What type of counts data to import for performing Isoform analysis in edgeR
Transcript-level differential expression using DESeq2
Comment: What type of counts data to import for performing Isoform analysis in edgeR
Answer: What type of counts data to import for performing Isoform analysis in edgeR
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