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plgem
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reset
0
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953
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calculating PLGEM p-values...
PLGEM
10.6 years ago
pstopka
• 0
0
votes
0
replies
1.5k
views
PLGEM on metabolomic data?
miRNA
Metabolomics
Proteomics
Normalization
plgem
miRNA
Metabolomics
Proteomics
plgem
13.3 years ago
Norman Pavelka
▴ 140
0
votes
4
replies
1.6k
views
Fwd: FW: plgem
plgem
plgem
updated 13.6 years ago by
Olli Kannaste
▴ 20 • written 13.6 years ago by
Norman Pavelka
▴ 140
0
votes
1
reply
1.3k
views
Help on PLGEM R Package Data Import
Biobase
plgem
Biobase
plgem
14.3 years ago
Norman Pavelka
▴ 140
0
votes
0
replies
1.1k
views
Fwd: Help on PLGEM R Package Data Import
Biobase
plgem
Biobase
plgem
14.3 years ago
Norman Pavelka
▴ 140
0
votes
0
replies
1.1k
views
Fwd: plgem for spectral counts
limma
plgem
limma
plgem
14.3 years ago
Norman Pavelka
▴ 140
0
votes
0
replies
1.3k
views
plgem for spectral counts
limma
plgem
limma
plgem
14.3 years ago
Norman Pavelka
▴ 140
0
votes
0
replies
1.5k
views
limma for spectral counts
limma
plgem
limma
plgem
14.3 years ago
Amin Moghaddasi
▴ 130
0
votes
5
replies
2.6k
views
Package plgem for analysis of spectral counts, was 'limma for spectral counts'
Microarray
Proteomics
limma
plgem
Microarray
Proteomics
limma
plgem
updated 15.2 years ago by
Yolande Tra
▴ 120 • written 15.2 years ago by
Pavelka, Norman
▴ 70
0
votes
0
replies
1.3k
views
replicable of *PLGEM*
plgem
cycle
plgem
cycle
15.3 years ago
Pavelka, Norman
▴ 70
0
votes
0
replies
1.1k
views
'plgem' package bug fix
plgem
plgem
15.4 years ago
Pavelka, Norman
▴ 70
11 results • Page
1 of 1
Recent ...
Replies
Comment: Clarification on counting in Rsubread (featureCounts)
by
Gordon Smyth
53k
Your follow-up question is very much wider than the first, and is essentially a research question rather a software question. As one of the…
Comment: Error in creating BSGenome package
by
Nguyen
• 0
I keep running into this error, please help: ``` Writing all sequences to './BSgenome.Panubis.NCBI.Panubis1.0/inst/extdata/single_sequenc…
Comment: Joining different datasets and analyzing using the group-specific condition effe
by
James W. MacDonald
68k
There is an example of how you can do this in the [DESeq vignette][1]. An alternative would be to fit a linear mixed model using the `vari…
Comment: Joining different datasets and analyzing using the group-specific condition effe
by
jason.chai
• 0
@mikelove Could I please ask if a similar method would work my set of samples? I have 255 samples which have been generated from 76 subject…
Comment: Clarification on counting in Rsubread (featureCounts)
by
Luca
• 0
Thanks to both of you for your helpful suggestions. The counting was already strand-specific at both the exon and gene levels. I resolved …
Votes
A: DESeq2: What is the unit of DESeq2 normalized read count (VST)? Is it tag per mi
Answer: Clarification on counting in Rsubread (featureCounts)
Comment: Clarification on counting in Rsubread (featureCounts)
C: ControlGenes/ housekeeping genes Deseq2
Answer: Clarification on counting in Rsubread (featureCounts)
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Lluís Revilla Sancho
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fl
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Gordon Smyth
53k
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Aleena_Ensembl
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